Hb_001266_130

Information

Type -
Description -
Location Contig1266: 130045-133812
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa011346mg
description hypothetical protein
nr
ID XP_012091077.1
description PREDICTED: soluble inorganic pyrophosphatase-like [Jatropha curcas]
swissprot
ID Q43187
description Soluble inorganic pyrophosphatase OS=Solanum tuberosum GN=PPA PE=2 SV=1
trembl
ID A0A067JP35
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03380 PE=3 SV=1
Gene Ontology
ID GO:0005737
description soluble inorganic pyrophosphatase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08042: 130717-134183 , PASA_asmbl_08043: 130012-134461 , PASA_asmbl_08044: 130065-134464 , PASA_asmbl_08045: 133317-133706
cDNA
(Sanger)
(ID:Location)		 039_K14.ab1: 132482-134183 , 043_A02.ab1: 130238-134464

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001266_130 0.0 - - PREDICTED: soluble inorganic pyrophosphatase-like [Jatropha curcas]
2 Hb_000020_020 0.1025182949 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
3 Hb_008878_020 0.1105956265 - - PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Populus euphratica]
4 Hb_000212_270 0.1124167268 - - calreticulin, putative [Ricinus communis]
5 Hb_000062_050 0.1141414442 - - protein binding protein, putative [Ricinus communis]
6 Hb_001501_020 0.1144314398 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
7 Hb_000046_430 0.1158953332 - - hypothetical protein JCGZ_02013 [Jatropha curcas]
8 Hb_070136_010 0.1209824453 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
9 Hb_000189_160 0.1215147191 - - PREDICTED: GDP-mannose 3,5-epimerase 2 [Eucalyptus grandis]
10 Hb_004306_130 0.1226965714 - - PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas]
11 Hb_001898_100 0.1228413724 - - PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Jatropha curcas]
12 Hb_002030_090 0.1240700413 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
13 Hb_007120_130 0.1256450795 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000694_050 0.1289338143 - - Nuclease PA3, putative [Ricinus communis]
15 Hb_000037_200 0.1311783885 - - RNA binding protein, putative [Ricinus communis]
16 Hb_000185_170 0.1315535036 - - ATP binding protein, putative [Ricinus communis]
17 Hb_093364_010 0.1320054379 - - PREDICTED: uncharacterized protein LOC105636199 [Jatropha curcas]
18 Hb_005999_020 0.1370060048 transcription factor TF Family: C2H2 PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Jatropha curcas]
19 Hb_003849_030 0.1410866641 - - hypothetical protein AALP_AA5G029900 [Arabis alpina]
20 Hb_002601_140 0.1411288043 - - signal transducer, putative [Ricinus communis]

Gene co-expression network

sample Hb_001266_130 Hb_001266_130 Hb_000020_020 Hb_000020_020 Hb_001266_130--Hb_000020_020 Hb_008878_020 Hb_008878_020 Hb_001266_130--Hb_008878_020 Hb_000212_270 Hb_000212_270 Hb_001266_130--Hb_000212_270 Hb_000062_050 Hb_000062_050 Hb_001266_130--Hb_000062_050 Hb_001501_020 Hb_001501_020 Hb_001266_130--Hb_001501_020 Hb_000046_430 Hb_000046_430 Hb_001266_130--Hb_000046_430 Hb_093364_010 Hb_093364_010 Hb_000020_020--Hb_093364_010 Hb_001918_030 Hb_001918_030 Hb_000020_020--Hb_001918_030 Hb_004611_050 Hb_004611_050 Hb_000020_020--Hb_004611_050 Hb_029095_010 Hb_029095_010 Hb_000020_020--Hb_029095_010 Hb_000020_020--Hb_000046_430 Hb_008878_020--Hb_000212_270 Hb_002030_090 Hb_002030_090 Hb_008878_020--Hb_002030_090 Hb_000697_020 Hb_000697_020 Hb_008878_020--Hb_000697_020 Hb_001172_150 Hb_001172_150 Hb_008878_020--Hb_001172_150 Hb_006478_050 Hb_006478_050 Hb_008878_020--Hb_006478_050 Hb_000175_200 Hb_000175_200 Hb_000212_270--Hb_000175_200 Hb_000212_270--Hb_000697_020 Hb_001898_100 Hb_001898_100 Hb_000212_270--Hb_001898_100 Hb_000212_270--Hb_001172_150 Hb_003119_130 Hb_003119_130 Hb_000212_270--Hb_003119_130 Hb_000037_200 Hb_000037_200 Hb_000062_050--Hb_000037_200 Hb_000185_170 Hb_000185_170 Hb_000062_050--Hb_000185_170 Hb_000987_020 Hb_000987_020 Hb_000062_050--Hb_000987_020 Hb_070136_010 Hb_070136_010 Hb_000062_050--Hb_070136_010 Hb_000694_050 Hb_000694_050 Hb_000062_050--Hb_000694_050 Hb_007113_020 Hb_007113_020 Hb_001501_020--Hb_007113_020 Hb_000500_360 Hb_000500_360 Hb_001501_020--Hb_000500_360 Hb_001501_020--Hb_002030_090 Hb_000261_370 Hb_000261_370 Hb_001501_020--Hb_000261_370 Hb_003224_010 Hb_003224_010 Hb_001501_020--Hb_003224_010 Hb_000189_160 Hb_000189_160 Hb_000046_430--Hb_000189_160 Hb_003849_030 Hb_003849_030 Hb_000046_430--Hb_003849_030 Hb_000046_430--Hb_003224_010 Hb_000689_010 Hb_000689_010 Hb_000046_430--Hb_000689_010 Hb_030982_050 Hb_030982_050 Hb_000046_430--Hb_030982_050 Hb_000046_430--Hb_004611_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.49791 54.5471 162.995 43.9824 0.40262 3.01342
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.12897 0.765336 0.348483 58.4556 100.898

CAGE analysis