Hb_030982_050

Information

Type -
Description -
Location Contig30982: 35046-47285
Sequence    

Annotation

kegg
ID rcu:RCOM_0106060
description Gamma-glutamyl hydrolase precursor, putative (EC:3.4.19.9)
nr
ID XP_012074574.1
description PREDICTED: gamma-glutamyl hydrolase 2-like [Jatropha curcas]
swissprot
ID O65355
description Gamma-glutamyl hydrolase 2 OS=Arabidopsis thaliana GN=GGH2 PE=1 SV=2
trembl
ID A0A067LFK5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13484 PE=4 SV=1
Gene Ontology
ID GO:0034722
description gamma-glutamyl hydrolase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32768: 35049-47295
cDNA
(Sanger)
(ID:Location)		 017_N08.ab1: 42863-47295 , 018_D09.ab1: 45223-47295 , 032_N03.ab1: 42795-47295

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030982_050 0.0 - - PREDICTED: gamma-glutamyl hydrolase 2-like [Jatropha curcas]
2 Hb_006970_170 0.0870235257 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
3 Hb_106089_010 0.0878237749 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
4 Hb_142026_010 0.0906654192 - - PREDICTED: probable mannitol dehydrogenase [Jatropha curcas]
5 Hb_000163_180 0.0967178855 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]
6 Hb_001141_160 0.0975195756 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
7 Hb_000046_430 0.0991378722 - - hypothetical protein JCGZ_02013 [Jatropha curcas]
8 Hb_059000_010 0.0993000165 - - hypothetical protein JCGZ_17736 [Jatropha curcas]
9 Hb_019496_040 0.0995680088 - - kinase family protein [Populus trichocarpa]
10 Hb_001544_070 0.1040303576 - - PREDICTED: multicopper oxidase LPR1 [Jatropha curcas]
11 Hb_003092_020 0.104746631 - - PREDICTED: heptahelical transmembrane protein 1 [Jatropha curcas]
12 Hb_000092_030 0.1056509163 - - PREDICTED: uncharacterized protein LOC105111213 [Populus euphratica]
13 Hb_000946_050 0.1068809347 - - cytochrome P450, putative [Ricinus communis]
14 Hb_003454_050 0.1090460743 - - PREDICTED: probable methyltransferase PMT14 [Jatropha curcas]
15 Hb_004611_050 0.11006843 - - PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas]
16 Hb_009554_030 0.1112687066 - - PREDICTED: chlorophyll synthase, chloroplastic [Prunus mume]
17 Hb_007894_120 0.1132294276 - - PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X1 [Jatropha curcas]
18 Hb_014250_010 0.1133661513 - - PREDICTED: alpha-mannosidase-like isoform X2 [Populus euphratica]
19 Hb_000689_010 0.1150687727 desease resistance Gene Name: LRR_8 PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
20 Hb_004122_060 0.117278852 - - PREDICTED: uncharacterized acetyltransferase At3g50280-like [Jatropha curcas]

Gene co-expression network

sample Hb_030982_050 Hb_030982_050 Hb_006970_170 Hb_006970_170 Hb_030982_050--Hb_006970_170 Hb_106089_010 Hb_106089_010 Hb_030982_050--Hb_106089_010 Hb_142026_010 Hb_142026_010 Hb_030982_050--Hb_142026_010 Hb_000163_180 Hb_000163_180 Hb_030982_050--Hb_000163_180 Hb_001141_160 Hb_001141_160 Hb_030982_050--Hb_001141_160 Hb_000046_430 Hb_000046_430 Hb_030982_050--Hb_000046_430 Hb_002871_110 Hb_002871_110 Hb_006970_170--Hb_002871_110 Hb_000500_230 Hb_000500_230 Hb_006970_170--Hb_000500_230 Hb_007894_120 Hb_007894_120 Hb_006970_170--Hb_007894_120 Hb_000010_370 Hb_000010_370 Hb_006970_170--Hb_000010_370 Hb_003849_030 Hb_003849_030 Hb_006970_170--Hb_003849_030 Hb_003454_050 Hb_003454_050 Hb_106089_010--Hb_003454_050 Hb_106089_010--Hb_142026_010 Hb_002205_150 Hb_002205_150 Hb_106089_010--Hb_002205_150 Hb_002902_040 Hb_002902_040 Hb_106089_010--Hb_002902_040 Hb_106089_010--Hb_006970_170 Hb_142026_010--Hb_002205_150 Hb_142026_010--Hb_002902_040 Hb_019496_040 Hb_019496_040 Hb_142026_010--Hb_019496_040 Hb_142026_010--Hb_003454_050 Hb_142026_010--Hb_000163_180 Hb_000365_180 Hb_000365_180 Hb_000163_180--Hb_000365_180 Hb_008749_010 Hb_008749_010 Hb_000163_180--Hb_008749_010 Hb_003092_020 Hb_003092_020 Hb_000163_180--Hb_003092_020 Hb_000163_180--Hb_106089_010 Hb_059000_010 Hb_059000_010 Hb_001141_160--Hb_059000_010 Hb_004122_060 Hb_004122_060 Hb_001141_160--Hb_004122_060 Hb_000946_050 Hb_000946_050 Hb_001141_160--Hb_000946_050 Hb_000398_140 Hb_000398_140 Hb_001141_160--Hb_000398_140 Hb_001544_070 Hb_001544_070 Hb_001141_160--Hb_001544_070 Hb_000189_160 Hb_000189_160 Hb_000046_430--Hb_000189_160 Hb_000046_430--Hb_003849_030 Hb_003224_010 Hb_003224_010 Hb_000046_430--Hb_003224_010 Hb_000689_010 Hb_000689_010 Hb_000046_430--Hb_000689_010 Hb_004611_050 Hb_004611_050 Hb_000046_430--Hb_004611_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.119978 46.2951 66.7443 62.9159 0.214643 0.175514
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0609152 0.0479242 0 40.0548 53.1354

CAGE analysis