Hb_106089_010

Information

Type -
Description -
Location Contig106089: 3328-4802
Sequence    

Annotation

kegg
ID pop:POPTR_0014s03730g
description hypothetical protein
nr
ID XP_012071743.1
description PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
swissprot
ID O49396
description Cytochrome P450 82C3 OS=Arabidopsis thaliana GN=CYP82C3 PE=2 SV=3
trembl
ID A0A067L2U3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04354 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp82d47-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_106089_010 0.0 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
2 Hb_003454_050 0.0522684505 - - PREDICTED: probable methyltransferase PMT14 [Jatropha curcas]
3 Hb_142026_010 0.0758110759 - - PREDICTED: probable mannitol dehydrogenase [Jatropha curcas]
4 Hb_002205_150 0.0830002395 - - RING-H2 finger protein ATL3C, putative [Ricinus communis]
5 Hb_030982_050 0.0878237749 - - PREDICTED: gamma-glutamyl hydrolase 2-like [Jatropha curcas]
6 Hb_002902_040 0.0879162293 - - PREDICTED: peroxidase 51 [Jatropha curcas]
7 Hb_006970_170 0.0932629775 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
8 Hb_019496_040 0.0935031969 - - kinase family protein [Populus trichocarpa]
9 Hb_012539_100 0.0936967271 - - PREDICTED: putative proline-rich receptor-like protein kinase PERK11 [Jatropha curcas]
10 Hb_000342_020 0.0946242043 - - bel1 homeotic protein, putative [Ricinus communis]
11 Hb_004228_070 0.0975819585 - - PREDICTED: uncharacterized protein LOC103338699 [Prunus mume]
12 Hb_001946_200 0.0981107795 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
13 Hb_000473_100 0.100290527 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
14 Hb_000163_180 0.1009733548 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]
15 Hb_003092_020 0.1043543537 - - PREDICTED: heptahelical transmembrane protein 1 [Jatropha curcas]
16 Hb_026240_020 0.1051563827 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g59780 [Jatropha curcas]
17 Hb_044653_050 0.1070742711 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
18 Hb_002151_020 0.1072868262 - - PREDICTED: uncharacterized protein LOC105637945 [Jatropha curcas]
19 Hb_021576_130 0.1082775226 - - PREDICTED: chorismate mutase 2 isoform X1 [Jatropha curcas]
20 Hb_007894_120 0.1091887627 - - PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_106089_010 Hb_106089_010 Hb_003454_050 Hb_003454_050 Hb_106089_010--Hb_003454_050 Hb_142026_010 Hb_142026_010 Hb_106089_010--Hb_142026_010 Hb_002205_150 Hb_002205_150 Hb_106089_010--Hb_002205_150 Hb_030982_050 Hb_030982_050 Hb_106089_010--Hb_030982_050 Hb_002902_040 Hb_002902_040 Hb_106089_010--Hb_002902_040 Hb_006970_170 Hb_006970_170 Hb_106089_010--Hb_006970_170 Hb_003454_050--Hb_002205_150 Hb_004228_070 Hb_004228_070 Hb_003454_050--Hb_004228_070 Hb_003454_050--Hb_142026_010 Hb_003454_050--Hb_002902_040 Hb_026240_020 Hb_026240_020 Hb_003454_050--Hb_026240_020 Hb_142026_010--Hb_002205_150 Hb_142026_010--Hb_002902_040 Hb_019496_040 Hb_019496_040 Hb_142026_010--Hb_019496_040 Hb_000163_180 Hb_000163_180 Hb_142026_010--Hb_000163_180 Hb_012539_100 Hb_012539_100 Hb_002205_150--Hb_012539_100 Hb_002205_150--Hb_004228_070 Hb_002205_150--Hb_002902_040 Hb_004634_030 Hb_004634_030 Hb_002205_150--Hb_004634_030 Hb_030982_050--Hb_006970_170 Hb_030982_050--Hb_142026_010 Hb_030982_050--Hb_000163_180 Hb_001141_160 Hb_001141_160 Hb_030982_050--Hb_001141_160 Hb_000046_430 Hb_000046_430 Hb_030982_050--Hb_000046_430 Hb_002151_020 Hb_002151_020 Hb_002902_040--Hb_002151_020 Hb_002902_040--Hb_019496_040 Hb_000342_020 Hb_000342_020 Hb_002902_040--Hb_000342_020 Hb_144703_010 Hb_144703_010 Hb_002902_040--Hb_144703_010 Hb_002871_110 Hb_002871_110 Hb_006970_170--Hb_002871_110 Hb_000500_230 Hb_000500_230 Hb_006970_170--Hb_000500_230 Hb_007894_120 Hb_007894_120 Hb_006970_170--Hb_007894_120 Hb_000010_370 Hb_000010_370 Hb_006970_170--Hb_000010_370 Hb_003849_030 Hb_003849_030 Hb_006970_170--Hb_003849_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.160635 15.7457 22.452 26.9493 0.211178 0.23034
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.194826 9.39553 19.2829

CAGE analysis