Hb_002151_020

Information

Type -
Description -
Location Contig2151: 42337-43119
Sequence    

Annotation

kegg
ID rcu:RCOM_1045610
description hypothetical protein
nr
ID XP_012077024.1
description PREDICTED: uncharacterized protein LOC105637945 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KNN2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07471 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22246: 42280-43324
cDNA
(Sanger)
(ID:Location)		 011_M21.ab1: 42280-43103

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002151_020 0.0 - - PREDICTED: uncharacterized protein LOC105637945 [Jatropha curcas]
2 Hb_002902_040 0.0362101953 - - PREDICTED: peroxidase 51 [Jatropha curcas]
3 Hb_001269_400 0.0761480251 - - cinnamoyl-CoA reductase [Hevea brasiliensis]
4 Hb_008598_010 0.0771586899 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
5 Hb_019496_040 0.0790279154 - - kinase family protein [Populus trichocarpa]
6 Hb_000045_080 0.0860806478 - - amino acid transporter, putative [Ricinus communis]
7 Hb_000473_100 0.0864134422 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
8 Hb_000069_540 0.0877884169 - - PREDICTED: hydroquinone glucosyltransferase [Jatropha curcas]
9 Hb_002205_150 0.0881213815 - - RING-H2 finger protein ATL3C, putative [Ricinus communis]
10 Hb_142026_010 0.0902961299 - - PREDICTED: probable mannitol dehydrogenase [Jatropha curcas]
11 Hb_000342_020 0.091171673 - - bel1 homeotic protein, putative [Ricinus communis]
12 Hb_144703_010 0.0919419216 - - Phospholipase A 2A, IIA,PLA2A [Theobroma cacao]
13 Hb_017862_030 0.0935503041 - - PREDICTED: proteasome assembly chaperone 4 [Jatropha curcas]
14 Hb_026144_040 0.0941392127 - - -
15 Hb_000162_070 0.0988232793 - - phospholipase C, putative [Ricinus communis]
16 Hb_007237_080 0.098924658 - - amino acid transporter, putative [Ricinus communis]
17 Hb_003454_050 0.1010177184 - - PREDICTED: probable methyltransferase PMT14 [Jatropha curcas]
18 Hb_004634_030 0.1019623405 - - conserved hypothetical protein [Ricinus communis]
19 Hb_012539_100 0.1021781662 - - PREDICTED: putative proline-rich receptor-like protein kinase PERK11 [Jatropha curcas]
20 Hb_106089_010 0.1072868262 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]

Gene co-expression network

sample Hb_002151_020 Hb_002151_020 Hb_002902_040 Hb_002902_040 Hb_002151_020--Hb_002902_040 Hb_001269_400 Hb_001269_400 Hb_002151_020--Hb_001269_400 Hb_008598_010 Hb_008598_010 Hb_002151_020--Hb_008598_010 Hb_019496_040 Hb_019496_040 Hb_002151_020--Hb_019496_040 Hb_000045_080 Hb_000045_080 Hb_002151_020--Hb_000045_080 Hb_000473_100 Hb_000473_100 Hb_002151_020--Hb_000473_100 Hb_002902_040--Hb_019496_040 Hb_142026_010 Hb_142026_010 Hb_002902_040--Hb_142026_010 Hb_002205_150 Hb_002205_150 Hb_002902_040--Hb_002205_150 Hb_000342_020 Hb_000342_020 Hb_002902_040--Hb_000342_020 Hb_144703_010 Hb_144703_010 Hb_002902_040--Hb_144703_010 Hb_149055_010 Hb_149055_010 Hb_001269_400--Hb_149055_010 Hb_001269_400--Hb_002902_040 Hb_001269_400--Hb_000473_100 Hb_007237_080 Hb_007237_080 Hb_001269_400--Hb_007237_080 Hb_001269_400--Hb_000342_020 Hb_008598_010--Hb_000045_080 Hb_026144_040 Hb_026144_040 Hb_008598_010--Hb_026144_040 Hb_008598_010--Hb_144703_010 Hb_000162_070 Hb_000162_070 Hb_008598_010--Hb_000162_070 Hb_000069_540 Hb_000069_540 Hb_008598_010--Hb_000069_540 Hb_019496_040--Hb_144703_010 Hb_019496_040--Hb_000069_540 Hb_019496_040--Hb_142026_010 Hb_019496_040--Hb_000342_020 Hb_017862_030 Hb_017862_030 Hb_000045_080--Hb_017862_030 Hb_000045_080--Hb_026144_040 Hb_000045_080--Hb_000162_070 Hb_000384_020 Hb_000384_020 Hb_000045_080--Hb_000384_020 Hb_000868_130 Hb_000868_130 Hb_000473_100--Hb_000868_130 Hb_144449_010 Hb_144449_010 Hb_000473_100--Hb_144449_010 Hb_000473_100--Hb_002902_040 Hb_000473_100--Hb_000069_540 Hb_000856_200 Hb_000856_200 Hb_000473_100--Hb_000856_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 9.24304 9.45923 20.1163 0.0302978 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0546024 0 5.26401 10.7181

CAGE analysis