Hb_008598_010

Information

Type -
Description -
Location Contig8598: 187-2948
Sequence    

Annotation

kegg
ID rcu:RCOM_1096970
description S-locus-specific glycoprotein S6 precursor, putative (EC:2.7.10.2)
nr
ID XP_012091449.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
swissprot
ID O64782
description G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 OS=Arabidopsis thaliana GN=SD129 PE=1 SV=1
trembl
ID A0A067JDL7
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_21324 PE=3 SV=1
Gene Ontology
ID GO:0004672
description s-locus-specific glycoprotein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008598_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
2 Hb_000045_080 0.0590001132 - - amino acid transporter, putative [Ricinus communis]
3 Hb_026144_040 0.0641928317 - - -
4 Hb_002151_020 0.0771586899 - - PREDICTED: uncharacterized protein LOC105637945 [Jatropha curcas]
5 Hb_144703_010 0.0787993487 - - Phospholipase A 2A, IIA,PLA2A [Theobroma cacao]
6 Hb_000162_070 0.0798723356 - - phospholipase C, putative [Ricinus communis]
7 Hb_000069_540 0.0825576546 - - PREDICTED: hydroquinone glucosyltransferase [Jatropha curcas]
8 Hb_017862_030 0.0855964322 - - PREDICTED: proteasome assembly chaperone 4 [Jatropha curcas]
9 Hb_002902_040 0.0857781074 - - PREDICTED: peroxidase 51 [Jatropha curcas]
10 Hb_001013_080 0.0967966031 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
11 Hb_173107_020 0.098980798 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
12 Hb_002598_020 0.1008034032 - - PREDICTED: sugar transporter ERD6-like 5 [Populus euphratica]
13 Hb_000384_020 0.1021908383 - - sucrose phosphate syntase, putative [Ricinus communis]
14 Hb_019496_040 0.1065014242 - - kinase family protein [Populus trichocarpa]
15 Hb_009771_040 0.1068106886 - - hypothetical protein JCGZ_25039 [Jatropha curcas]
16 Hb_000991_080 0.1084841074 - - kinase, putative [Ricinus communis]
17 Hb_007237_080 0.1101905914 - - amino acid transporter, putative [Ricinus communis]
18 Hb_001913_030 0.1148493929 - - ankyrin repeat protein [Bruguiera gymnorhiza]
19 Hb_002902_070 0.1156681446 - - PREDICTED: BTB/POZ domain-containing protein At5g67385 [Jatropha curcas]
20 Hb_000342_020 0.1176936544 - - bel1 homeotic protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_008598_010 Hb_008598_010 Hb_000045_080 Hb_000045_080 Hb_008598_010--Hb_000045_080 Hb_026144_040 Hb_026144_040 Hb_008598_010--Hb_026144_040 Hb_002151_020 Hb_002151_020 Hb_008598_010--Hb_002151_020 Hb_144703_010 Hb_144703_010 Hb_008598_010--Hb_144703_010 Hb_000162_070 Hb_000162_070 Hb_008598_010--Hb_000162_070 Hb_000069_540 Hb_000069_540 Hb_008598_010--Hb_000069_540 Hb_017862_030 Hb_017862_030 Hb_000045_080--Hb_017862_030 Hb_000045_080--Hb_026144_040 Hb_000045_080--Hb_000162_070 Hb_000045_080--Hb_002151_020 Hb_000384_020 Hb_000384_020 Hb_000045_080--Hb_000384_020 Hb_007237_080 Hb_007237_080 Hb_026144_040--Hb_007237_080 Hb_026144_040--Hb_000162_070 Hb_002598_020 Hb_002598_020 Hb_026144_040--Hb_002598_020 Hb_026144_040--Hb_002151_020 Hb_002902_040 Hb_002902_040 Hb_002151_020--Hb_002902_040 Hb_001269_400 Hb_001269_400 Hb_002151_020--Hb_001269_400 Hb_019496_040 Hb_019496_040 Hb_002151_020--Hb_019496_040 Hb_000473_100 Hb_000473_100 Hb_002151_020--Hb_000473_100 Hb_144703_010--Hb_000069_540 Hb_144703_010--Hb_019496_040 Hb_000472_020 Hb_000472_020 Hb_144703_010--Hb_000472_020 Hb_144703_010--Hb_002902_040 Hb_000342_020 Hb_000342_020 Hb_144703_010--Hb_000342_020 Hb_000162_070--Hb_007237_080 Hb_000991_080 Hb_000991_080 Hb_000162_070--Hb_000991_080 Hb_002811_110 Hb_002811_110 Hb_000162_070--Hb_002811_110 Hb_002902_070 Hb_002902_070 Hb_000069_540--Hb_002902_070 Hb_000069_540--Hb_019496_040 Hb_000868_130 Hb_000868_130 Hb_000069_540--Hb_000868_130 Hb_000069_540--Hb_002902_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0536888 0.0320027 0.0976245 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0201454 0.0527243

CAGE analysis