Hb_000868_130

Information

Type -
Description -
Location Contig868: 222290-226830
Sequence    

Annotation

kegg
ID rcu:RCOM_0708920
description phosphoinositide 5-phosphatase, putative
nr
ID XP_002516207.1
description phosphoinositide 5-phosphatase, putative [Ricinus communis]
swissprot
ID Q94A27
description Phosphoinositide phosphatase SAC2 OS=Arabidopsis thaliana GN=SAC2 PE=2 SV=1
trembl
ID B9RR38
description Phosphoinositide 5-phosphatase, putative OS=Ricinus communis GN=RCOM_0708920 PE=4 SV=1
Gene Ontology
ID GO:0042578
description phosphoinositide phosphatase sac3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61056: 222052-222166 , PASA_asmbl_61057: 222557-222985 , PASA_asmbl_61058: 222340-224275
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000868_130 0.0 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
2 Hb_001046_030 0.0544408413 - - UDP-glucosyltransferase, putative [Ricinus communis]
3 Hb_002902_070 0.0567480315 - - PREDICTED: BTB/POZ domain-containing protein At5g67385 [Jatropha curcas]
4 Hb_017358_020 0.063756205 - - hypothetical protein POPTR_0014s16490g [Populus trichocarpa]
5 Hb_000473_100 0.0673683426 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
6 Hb_000069_540 0.0710287732 - - PREDICTED: hydroquinone glucosyltransferase [Jatropha curcas]
7 Hb_003266_010 0.0753762143 - - hypothetical protein JCGZ_21945 [Jatropha curcas]
8 Hb_001417_060 0.0844028769 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
9 Hb_002095_020 0.0873420098 - - PREDICTED: glutamate receptor 3.4-like isoform X1 [Jatropha curcas]
10 Hb_019496_040 0.093142826 - - kinase family protein [Populus trichocarpa]
11 Hb_032779_010 0.0983132041 - - unnamed protein product [Vitis vinifera]
12 Hb_144449_010 0.0991983497 - - Potassium transporter, putative [Ricinus communis]
13 Hb_032695_010 0.0994443273 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Vitis vinifera]
14 Hb_000856_200 0.1001355283 - - ATPase 4, plasma membrane-type -like protein [Gossypium arboreum]
15 Hb_000941_090 0.1051083839 - - PREDICTED: protein trichome birefringence [Jatropha curcas]
16 Hb_143629_200 0.1064519741 - - hypothetical protein POPTR_0013s00300g [Populus trichocarpa]
17 Hb_000427_040 0.1072015959 - - Gibberellin receptor GID1, putative [Ricinus communis]
18 Hb_001369_390 0.1108830734 - - Glycerol-3-phosphate transporter, putative [Ricinus communis]
19 Hb_144703_010 0.1133683887 - - Phospholipase A 2A, IIA,PLA2A [Theobroma cacao]
20 Hb_001789_120 0.113725965 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_000868_130 Hb_000868_130 Hb_001046_030 Hb_001046_030 Hb_000868_130--Hb_001046_030 Hb_002902_070 Hb_002902_070 Hb_000868_130--Hb_002902_070 Hb_017358_020 Hb_017358_020 Hb_000868_130--Hb_017358_020 Hb_000473_100 Hb_000473_100 Hb_000868_130--Hb_000473_100 Hb_000069_540 Hb_000069_540 Hb_000868_130--Hb_000069_540 Hb_003266_010 Hb_003266_010 Hb_000868_130--Hb_003266_010 Hb_001046_030--Hb_017358_020 Hb_001417_060 Hb_001417_060 Hb_001046_030--Hb_001417_060 Hb_001046_030--Hb_003266_010 Hb_032695_010 Hb_032695_010 Hb_001046_030--Hb_032695_010 Hb_000856_200 Hb_000856_200 Hb_001046_030--Hb_000856_200 Hb_002902_070--Hb_000069_540 Hb_001305_020 Hb_001305_020 Hb_002902_070--Hb_001305_020 Hb_000427_040 Hb_000427_040 Hb_002902_070--Hb_000427_040 Hb_000834_100 Hb_000834_100 Hb_002902_070--Hb_000834_100 Hb_144703_010 Hb_144703_010 Hb_002902_070--Hb_144703_010 Hb_017358_020--Hb_001417_060 Hb_017358_020--Hb_003266_010 Hb_017358_020--Hb_032695_010 Hb_000162_200 Hb_000162_200 Hb_017358_020--Hb_000162_200 Hb_144449_010 Hb_144449_010 Hb_000473_100--Hb_144449_010 Hb_002902_040 Hb_002902_040 Hb_000473_100--Hb_002902_040 Hb_000473_100--Hb_000069_540 Hb_001269_400 Hb_001269_400 Hb_000473_100--Hb_001269_400 Hb_000473_100--Hb_000856_200 Hb_000069_540--Hb_144703_010 Hb_019496_040 Hb_019496_040 Hb_000069_540--Hb_019496_040 Hb_008598_010 Hb_008598_010 Hb_000069_540--Hb_008598_010 Hb_000069_540--Hb_002902_040 Hb_002095_020 Hb_002095_020 Hb_003266_010--Hb_002095_020 Hb_003266_010--Hb_000473_100 Hb_003266_010--Hb_144449_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.99779 5.73836 9.74548 0.0145698 0.0295633
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0354767 0 0 3.49249 10.7483

CAGE analysis