Hb_032695_010

Information

Type -
Description -
Location Contig32695: 24688-27900
Sequence    

Annotation

kegg
ID vvi:100265616
description LRR receptor-like serine/threonine-protein kinase FLS2
nr
ID XP_002265750.2
description PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Vitis vinifera]
swissprot
ID C0LGQ5
description LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1
trembl
ID M5XSN5
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa027090mg PE=4 SV=1
Gene Ontology
ID GO:0003824
description lrr receptor-like serine threonine-protein kinase fls2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032695_010 0.0 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Vitis vinifera]
2 Hb_000025_590 0.074300286 - - PREDICTED: cytochrome P450 94A1-like isoform X1 [Jatropha curcas]
3 Hb_001883_010 0.0810957592 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
4 Hb_000680_130 0.087513626 - - beta-galactosidase, putative [Ricinus communis]
5 Hb_017358_020 0.0899295242 - - hypothetical protein POPTR_0014s16490g [Populus trichocarpa]
6 Hb_001046_030 0.0906860698 - - UDP-glucosyltransferase, putative [Ricinus communis]
7 Hb_000987_020 0.0956114655 - - PREDICTED: protein trichome birefringence-like 35 [Jatropha curcas]
8 Hb_001579_060 0.0967919306 - - carbonic anhydrase, putative [Ricinus communis]
9 Hb_000868_130 0.0994443273 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
10 Hb_000010_370 0.1025488424 - - PREDICTED: uncharacterized protein LOC105640263 [Jatropha curcas]
11 Hb_006827_030 0.106563802 - - oligopeptide transporter, putative [Ricinus communis]
12 Hb_001417_060 0.1081608488 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
13 Hb_032779_010 0.1105168765 - - unnamed protein product [Vitis vinifera]
14 Hb_004946_010 0.1105465674 - - hypothetical protein POPTR_0013s035502g, partial [Populus trichocarpa]
15 Hb_000694_050 0.1107548585 - - Nuclease PA3, putative [Ricinus communis]
16 Hb_002871_110 0.1180200004 transcription factor TF Family: ARF hypothetical protein POPTR_0014s12980g [Populus trichocarpa]
17 Hb_143629_200 0.1186356239 - - hypothetical protein POPTR_0013s00300g [Populus trichocarpa]
18 Hb_000901_010 0.1192135996 - - PREDICTED: putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 [Jatropha curcas]
19 Hb_003680_010 0.1207555627 - - UDP-glucosyltransferase, putative [Ricinus communis]
20 Hb_002078_320 0.1210753394 - - PREDICTED: glucuronoxylan 4-O-methyltransferase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_032695_010 Hb_032695_010 Hb_000025_590 Hb_000025_590 Hb_032695_010--Hb_000025_590 Hb_001883_010 Hb_001883_010 Hb_032695_010--Hb_001883_010 Hb_000680_130 Hb_000680_130 Hb_032695_010--Hb_000680_130 Hb_017358_020 Hb_017358_020 Hb_032695_010--Hb_017358_020 Hb_001046_030 Hb_001046_030 Hb_032695_010--Hb_001046_030 Hb_000987_020 Hb_000987_020 Hb_032695_010--Hb_000987_020 Hb_000010_370 Hb_000010_370 Hb_000025_590--Hb_000010_370 Hb_002871_110 Hb_002871_110 Hb_000025_590--Hb_002871_110 Hb_000215_290 Hb_000215_290 Hb_000025_590--Hb_000215_290 Hb_006970_170 Hb_006970_170 Hb_000025_590--Hb_006970_170 Hb_032779_010 Hb_032779_010 Hb_000025_590--Hb_032779_010 Hb_001579_060 Hb_001579_060 Hb_001883_010--Hb_001579_060 Hb_000694_050 Hb_000694_050 Hb_001883_010--Hb_000694_050 Hb_001883_010--Hb_000680_130 Hb_001883_010--Hb_000025_590 Hb_006827_030 Hb_006827_030 Hb_001883_010--Hb_006827_030 Hb_000373_010 Hb_000373_010 Hb_000680_130--Hb_000373_010 Hb_000705_040 Hb_000705_040 Hb_000680_130--Hb_000705_040 Hb_002155_020 Hb_002155_020 Hb_000680_130--Hb_002155_020 Hb_002636_070 Hb_002636_070 Hb_000680_130--Hb_002636_070 Hb_000680_130--Hb_001579_060 Hb_017358_020--Hb_001046_030 Hb_001417_060 Hb_001417_060 Hb_017358_020--Hb_001417_060 Hb_000868_130 Hb_000868_130 Hb_017358_020--Hb_000868_130 Hb_003266_010 Hb_003266_010 Hb_017358_020--Hb_003266_010 Hb_000162_200 Hb_000162_200 Hb_017358_020--Hb_000162_200 Hb_001046_030--Hb_001417_060 Hb_001046_030--Hb_000868_130 Hb_001046_030--Hb_003266_010 Hb_000856_200 Hb_000856_200 Hb_001046_030--Hb_000856_200 Hb_000987_020--Hb_001579_060 Hb_002078_320 Hb_002078_320 Hb_000987_020--Hb_002078_320 Hb_000901_010 Hb_000901_010 Hb_000987_020--Hb_000901_010 Hb_000185_170 Hb_000185_170 Hb_000987_020--Hb_000185_170 Hb_000987_020--Hb_000694_050 Hb_000037_200 Hb_000037_200 Hb_000987_020--Hb_000037_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.009793 0.0136742 0.0129485 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00841862 0.0226795

CAGE analysis