Hb_000025_590

Information

Type -
Description -
Location Contig25: 548731-550293
Sequence    

Annotation

kegg
ID rcu:RCOM_0833060
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_012074488.1
description PREDICTED: cytochrome P450 94A1-like isoform X1 [Jatropha curcas]
swissprot
ID O81117
description Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2
trembl
ID A0A067KUN9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08390 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 94a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26146: 549209-550097
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000025_590 0.0 - - PREDICTED: cytochrome P450 94A1-like isoform X1 [Jatropha curcas]
2 Hb_000010_370 0.0616366105 - - PREDICTED: uncharacterized protein LOC105640263 [Jatropha curcas]
3 Hb_032695_010 0.074300286 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Vitis vinifera]
4 Hb_002871_110 0.0911313006 transcription factor TF Family: ARF hypothetical protein POPTR_0014s12980g [Populus trichocarpa]
5 Hb_000215_290 0.0952884285 transcription factor TF Family: NAC PREDICTED: protein BEARSKIN2 isoform X2 [Jatropha curcas]
6 Hb_006970_170 0.096611497 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
7 Hb_032779_010 0.0994929025 - - unnamed protein product [Vitis vinifera]
8 Hb_001883_010 0.0996421909 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
9 Hb_002849_120 0.1038655542 - - ferric reductase oxidase [Manihot esculenta]
10 Hb_003849_030 0.1059649241 - - hypothetical protein AALP_AA5G029900 [Arabis alpina]
11 Hb_000500_230 0.1062349639 - - hypothetical protein RCOM_0634810 [Ricinus communis]
12 Hb_001153_090 0.1093860068 - - PREDICTED: protein FAM63A [Jatropha curcas]
13 Hb_000260_480 0.1096499994 transcription factor TF Family: GRAS PREDICTED: protein SCARECROW [Jatropha curcas]
14 Hb_006827_030 0.1103936272 - - oligopeptide transporter, putative [Ricinus communis]
15 Hb_001706_020 0.1118555535 - - PREDICTED: organic cation/carnitine transporter 7 [Jatropha curcas]
16 Hb_001579_060 0.1119351867 - - carbonic anhydrase, putative [Ricinus communis]
17 Hb_064293_010 0.1139753507 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
18 Hb_005488_030 0.1155569152 - - F3F9.11 [Arabidopsis lyrata subsp. lyrata]
19 Hb_007747_100 0.1157956722 - - PREDICTED: probable F-box protein At1g60180 [Jatropha curcas]
20 Hb_001174_030 0.1194734622 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_000025_590 Hb_000025_590 Hb_000010_370 Hb_000010_370 Hb_000025_590--Hb_000010_370 Hb_032695_010 Hb_032695_010 Hb_000025_590--Hb_032695_010 Hb_002871_110 Hb_002871_110 Hb_000025_590--Hb_002871_110 Hb_000215_290 Hb_000215_290 Hb_000025_590--Hb_000215_290 Hb_006970_170 Hb_006970_170 Hb_000025_590--Hb_006970_170 Hb_032779_010 Hb_032779_010 Hb_000025_590--Hb_032779_010 Hb_000500_230 Hb_000500_230 Hb_000010_370--Hb_000500_230 Hb_000010_370--Hb_002871_110 Hb_000010_370--Hb_006970_170 Hb_000260_480 Hb_000260_480 Hb_000010_370--Hb_000260_480 Hb_007894_120 Hb_007894_120 Hb_000010_370--Hb_007894_120 Hb_001883_010 Hb_001883_010 Hb_032695_010--Hb_001883_010 Hb_000680_130 Hb_000680_130 Hb_032695_010--Hb_000680_130 Hb_017358_020 Hb_017358_020 Hb_032695_010--Hb_017358_020 Hb_001046_030 Hb_001046_030 Hb_032695_010--Hb_001046_030 Hb_000987_020 Hb_000987_020 Hb_032695_010--Hb_000987_020 Hb_002871_110--Hb_006970_170 Hb_002871_110--Hb_000500_230 Hb_000694_050 Hb_000694_050 Hb_002871_110--Hb_000694_050 Hb_002871_110--Hb_007894_120 Hb_001706_020 Hb_001706_020 Hb_000215_290--Hb_001706_020 Hb_144703_010 Hb_144703_010 Hb_000215_290--Hb_144703_010 Hb_143629_200 Hb_143629_200 Hb_000215_290--Hb_143629_200 Hb_001174_030 Hb_001174_030 Hb_000215_290--Hb_001174_030 Hb_005488_030 Hb_005488_030 Hb_000215_290--Hb_005488_030 Hb_006970_170--Hb_000500_230 Hb_006970_170--Hb_007894_120 Hb_030982_050 Hb_030982_050 Hb_006970_170--Hb_030982_050 Hb_003849_030 Hb_003849_030 Hb_006970_170--Hb_003849_030 Hb_000427_040 Hb_000427_040 Hb_032779_010--Hb_000427_040 Hb_014700_030 Hb_014700_030 Hb_032779_010--Hb_014700_030 Hb_004880_050 Hb_004880_050 Hb_032779_010--Hb_004880_050 Hb_001789_120 Hb_001789_120 Hb_032779_010--Hb_001789_120 Hb_005051_010 Hb_005051_010 Hb_032779_010--Hb_005051_010 Hb_002902_070 Hb_002902_070 Hb_032779_010--Hb_002902_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 14.4411 14.1848 12.0509 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0297887 0.023436 0 7.94715 21.069

CAGE analysis