Hb_002902_070

Information

Type -
Description -
Location Contig2902: 49281-52462
Sequence    

Annotation

kegg
ID rcu:RCOM_0396200
description Root phototropism protein, putative
nr
ID XP_012079373.1
description PREDICTED: BTB/POZ domain-containing protein At5g67385 [Jatropha curcas]
swissprot
ID Q66GP0
description BTB/POZ domain-containing protein At5g67385 OS=Arabidopsis thaliana GN=At5g67385 PE=1 SV=2
trembl
ID A0A067K7F2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12513 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30426: 49271-52625
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002902_070 0.0 - - PREDICTED: BTB/POZ domain-containing protein At5g67385 [Jatropha curcas]
2 Hb_000069_540 0.0397312966 - - PREDICTED: hydroquinone glucosyltransferase [Jatropha curcas]
3 Hb_000868_130 0.0567480315 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
4 Hb_001305_020 0.0783091418 - - PREDICTED: uncharacterized protein LOC102623247 [Citrus sinensis]
5 Hb_000427_040 0.0794552603 - - Gibberellin receptor GID1, putative [Ricinus communis]
6 Hb_000834_100 0.0840721527 - - PREDICTED: uncharacterized protein LOC105178355 [Sesamum indicum]
7 Hb_144703_010 0.088249643 - - Phospholipase A 2A, IIA,PLA2A [Theobroma cacao]
8 Hb_032779_010 0.0883269887 - - unnamed protein product [Vitis vinifera]
9 Hb_019496_040 0.0888191926 - - kinase family protein [Populus trichocarpa]
10 Hb_005051_010 0.0904358899 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
11 Hb_001046_030 0.0933903546 - - UDP-glucosyltransferase, putative [Ricinus communis]
12 Hb_000473_100 0.0960350847 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
13 Hb_002095_020 0.0991211298 - - PREDICTED: glutamate receptor 3.4-like isoform X1 [Jatropha curcas]
14 Hb_017358_020 0.0991481503 - - hypothetical protein POPTR_0014s16490g [Populus trichocarpa]
15 Hb_003266_010 0.1043599244 - - hypothetical protein JCGZ_21945 [Jatropha curcas]
16 Hb_000215_290 0.1066821027 transcription factor TF Family: NAC PREDICTED: protein BEARSKIN2 isoform X2 [Jatropha curcas]
17 Hb_004204_220 0.1067899721 - - -
18 Hb_001706_020 0.114672967 - - PREDICTED: organic cation/carnitine transporter 7 [Jatropha curcas]
19 Hb_008598_010 0.1156681446 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
20 Hb_002902_040 0.1159388818 - - PREDICTED: peroxidase 51 [Jatropha curcas]

Gene co-expression network

sample Hb_002902_070 Hb_002902_070 Hb_000069_540 Hb_000069_540 Hb_002902_070--Hb_000069_540 Hb_000868_130 Hb_000868_130 Hb_002902_070--Hb_000868_130 Hb_001305_020 Hb_001305_020 Hb_002902_070--Hb_001305_020 Hb_000427_040 Hb_000427_040 Hb_002902_070--Hb_000427_040 Hb_000834_100 Hb_000834_100 Hb_002902_070--Hb_000834_100 Hb_144703_010 Hb_144703_010 Hb_002902_070--Hb_144703_010 Hb_000069_540--Hb_144703_010 Hb_019496_040 Hb_019496_040 Hb_000069_540--Hb_019496_040 Hb_000069_540--Hb_000868_130 Hb_008598_010 Hb_008598_010 Hb_000069_540--Hb_008598_010 Hb_002902_040 Hb_002902_040 Hb_000069_540--Hb_002902_040 Hb_001046_030 Hb_001046_030 Hb_000868_130--Hb_001046_030 Hb_017358_020 Hb_017358_020 Hb_000868_130--Hb_017358_020 Hb_000473_100 Hb_000473_100 Hb_000868_130--Hb_000473_100 Hb_003266_010 Hb_003266_010 Hb_000868_130--Hb_003266_010 Hb_000622_030 Hb_000622_030 Hb_001305_020--Hb_000622_030 Hb_005051_010 Hb_005051_010 Hb_001305_020--Hb_005051_010 Hb_005723_090 Hb_005723_090 Hb_001305_020--Hb_005723_090 Hb_001158_250 Hb_001158_250 Hb_001305_020--Hb_001158_250 Hb_001305_020--Hb_000834_100 Hb_032779_010 Hb_032779_010 Hb_000427_040--Hb_032779_010 Hb_000427_040--Hb_005051_010 Hb_014700_030 Hb_014700_030 Hb_000427_040--Hb_014700_030 Hb_000427_040--Hb_001305_020 Hb_000427_040--Hb_000069_540 Hb_003858_060 Hb_003858_060 Hb_000834_100--Hb_003858_060 Hb_000834_100--Hb_000427_040 Hb_000834_100--Hb_000069_540 Hb_004204_220 Hb_004204_220 Hb_000834_100--Hb_004204_220 Hb_144703_010--Hb_019496_040 Hb_144703_010--Hb_008598_010 Hb_000472_020 Hb_000472_020 Hb_144703_010--Hb_000472_020 Hb_144703_010--Hb_002902_040 Hb_000342_020 Hb_000342_020 Hb_144703_010--Hb_000342_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 32.8897 25.274 54.4984 0.0272029 0.0257776
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 17.1779 57.5576

CAGE analysis