Hb_012539_100

Information

Type -
Description -
Location Contig12539: 97390-98127
Sequence    

Annotation

kegg
ID rcu:RCOM_0802650
description hypothetical protein
nr
ID XP_012077427.1
description PREDICTED: putative proline-rich receptor-like protein kinase PERK11 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KDL2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07768 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012539_100 0.0 - - PREDICTED: putative proline-rich receptor-like protein kinase PERK11 [Jatropha curcas]
2 Hb_002205_150 0.0647486355 - - RING-H2 finger protein ATL3C, putative [Ricinus communis]
3 Hb_004634_030 0.0906657174 - - conserved hypothetical protein [Ricinus communis]
4 Hb_142026_010 0.0930243538 - - PREDICTED: probable mannitol dehydrogenase [Jatropha curcas]
5 Hb_106089_010 0.0936967271 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
6 Hb_002902_040 0.094786225 - - PREDICTED: peroxidase 51 [Jatropha curcas]
7 Hb_007221_040 0.099857786 - - PREDICTED: probable receptor-like protein kinase At5g24010 isoform X2 [Populus euphratica]
8 Hb_000742_130 0.1015887048 - - PREDICTED: probable receptor-like protein kinase At1g30570 [Jatropha curcas]
9 Hb_003454_050 0.1020317178 - - PREDICTED: probable methyltransferase PMT14 [Jatropha curcas]
10 Hb_002151_020 0.1021781662 - - PREDICTED: uncharacterized protein LOC105637945 [Jatropha curcas]
11 Hb_004228_070 0.1087307406 - - PREDICTED: uncharacterized protein LOC103338699 [Prunus mume]
12 Hb_002518_220 0.1129876894 - - PREDICTED: uncharacterized protein LOC105631001 isoform X2 [Jatropha curcas]
13 Hb_003849_200 0.1139189268 - - PREDICTED: BTB/POZ domain-containing protein At1g67900-like isoform X1 [Citrus sinensis]
14 Hb_000342_020 0.1170538777 - - bel1 homeotic protein, putative [Ricinus communis]
15 Hb_003581_050 0.1191662095 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-54 [Jatropha curcas]
16 Hb_021576_130 0.1217464523 - - PREDICTED: chorismate mutase 2 isoform X1 [Jatropha curcas]
17 Hb_000613_250 0.1229347484 - - PREDICTED: nudix hydrolase 2-like [Jatropha curcas]
18 Hb_000163_180 0.1252968881 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]
19 Hb_019496_040 0.126159647 - - kinase family protein [Populus trichocarpa]
20 Hb_001946_200 0.1264138476 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_012539_100 Hb_012539_100 Hb_002205_150 Hb_002205_150 Hb_012539_100--Hb_002205_150 Hb_004634_030 Hb_004634_030 Hb_012539_100--Hb_004634_030 Hb_142026_010 Hb_142026_010 Hb_012539_100--Hb_142026_010 Hb_106089_010 Hb_106089_010 Hb_012539_100--Hb_106089_010 Hb_002902_040 Hb_002902_040 Hb_012539_100--Hb_002902_040 Hb_007221_040 Hb_007221_040 Hb_012539_100--Hb_007221_040 Hb_002205_150--Hb_142026_010 Hb_004228_070 Hb_004228_070 Hb_002205_150--Hb_004228_070 Hb_003454_050 Hb_003454_050 Hb_002205_150--Hb_003454_050 Hb_002205_150--Hb_002902_040 Hb_002205_150--Hb_004634_030 Hb_004634_030--Hb_142026_010 Hb_008725_020 Hb_008725_020 Hb_004634_030--Hb_008725_020 Hb_000098_260 Hb_000098_260 Hb_004634_030--Hb_000098_260 Hb_004634_030--Hb_002902_040 Hb_142026_010--Hb_002902_040 Hb_019496_040 Hb_019496_040 Hb_142026_010--Hb_019496_040 Hb_142026_010--Hb_106089_010 Hb_142026_010--Hb_003454_050 Hb_000163_180 Hb_000163_180 Hb_142026_010--Hb_000163_180 Hb_106089_010--Hb_003454_050 Hb_106089_010--Hb_002205_150 Hb_030982_050 Hb_030982_050 Hb_106089_010--Hb_030982_050 Hb_106089_010--Hb_002902_040 Hb_006970_170 Hb_006970_170 Hb_106089_010--Hb_006970_170 Hb_002151_020 Hb_002151_020 Hb_002902_040--Hb_002151_020 Hb_002902_040--Hb_019496_040 Hb_000342_020 Hb_000342_020 Hb_002902_040--Hb_000342_020 Hb_144703_010 Hb_144703_010 Hb_002902_040--Hb_144703_010 Hb_007221_040--Hb_004228_070 Hb_007221_040--Hb_002205_150 Hb_021576_130 Hb_021576_130 Hb_007221_040--Hb_021576_130 Hb_007221_040--Hb_003454_050 Hb_000434_060 Hb_000434_060 Hb_007221_040--Hb_000434_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.00053 1.11645 1.72738 0.0306109 0.0288996
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.384149 0.823899

CAGE analysis