Hb_000098_260

Information

Type -
Description -
Location Contig98: 280519-281884
Sequence    

Annotation

kegg
ID pop:POPTR_0016s01860g
description hypothetical protein
nr
ID AFD61601.1
description anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
swissprot
ID Q40285
description Anthocyanidin 3-O-glucosyltransferase 2 (Fragment) OS=Manihot esculenta GN=GT2 PE=2 SV=1
trembl
ID H9BMN5
description Anthocyanidin 3-O-glucosyltransferase OS=Hevea brasiliensis GN=ANGT1 PE=2 SV=1
Gene Ontology
ID GO:0016758
description anthocyanidin 3-o-glucosyltransferase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64377: 280617-280851 , PASA_asmbl_64381: 259818-282014
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000098_260 0.0 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
2 Hb_092975_010 0.0676531056 - - hypothetical protein JCGZ_04359 [Jatropha curcas]
3 Hb_002641_140 0.0809835651 - - protein phosphatase 2c, putative [Ricinus communis]
4 Hb_000365_430 0.0870479894 - - PREDICTED: BTB/POZ domain-containing protein At3g08570-like [Jatropha curcas]
5 Hb_000411_020 0.0878023202 - - cytochrome P450, putative [Ricinus communis]
6 Hb_000742_130 0.0882743207 - - PREDICTED: probable receptor-like protein kinase At1g30570 [Jatropha curcas]
7 Hb_000645_160 0.0903898937 - - protein translocase, putative [Ricinus communis]
8 Hb_012787_060 0.0913129375 - - PREDICTED: glutathione S-transferase U17-like [Prunus mume]
9 Hb_003092_020 0.0949313471 - - PREDICTED: heptahelical transmembrane protein 1 [Jatropha curcas]
10 Hb_002888_100 0.095448964 - - PREDICTED: uncharacterized protein LOC103699074, partial [Phoenix dactylifera]
11 Hb_004634_030 0.0959416114 - - conserved hypothetical protein [Ricinus communis]
12 Hb_189208_050 0.0974544553 - - PREDICTED: uncharacterized protein LOC105642694 isoform X2 [Jatropha curcas]
13 Hb_000329_720 0.1027782633 transcription factor TF Family: ERF hypothetical protein POPTR_0014s05500g [Populus trichocarpa]
14 Hb_149055_010 0.1041739405 - - cinnamate 4-hydroxylase [Leucaena leucocephala]
15 Hb_009189_100 0.1066511291 - - PREDICTED: patellin-6 [Jatropha curcas]
16 Hb_001562_030 0.107048295 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
17 Hb_000163_180 0.1080734546 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]
18 Hb_003747_250 0.1083609007 - - PREDICTED: potassium transporter 7 isoform X2 [Elaeis guineensis]
19 Hb_032920_030 0.1135181768 - - signal transducer, putative [Ricinus communis]
20 Hb_001269_400 0.1143022522 - - cinnamoyl-CoA reductase [Hevea brasiliensis]

Gene co-expression network

sample Hb_000098_260 Hb_000098_260 Hb_092975_010 Hb_092975_010 Hb_000098_260--Hb_092975_010 Hb_002641_140 Hb_002641_140 Hb_000098_260--Hb_002641_140 Hb_000365_430 Hb_000365_430 Hb_000098_260--Hb_000365_430 Hb_000411_020 Hb_000411_020 Hb_000098_260--Hb_000411_020 Hb_000742_130 Hb_000742_130 Hb_000098_260--Hb_000742_130 Hb_000645_160 Hb_000645_160 Hb_000098_260--Hb_000645_160 Hb_002522_040 Hb_002522_040 Hb_092975_010--Hb_002522_040 Hb_000329_720 Hb_000329_720 Hb_092975_010--Hb_000329_720 Hb_092975_010--Hb_000742_130 Hb_002171_020 Hb_002171_020 Hb_092975_010--Hb_002171_020 Hb_004634_030 Hb_004634_030 Hb_092975_010--Hb_004634_030 Hb_008021_040 Hb_008021_040 Hb_002641_140--Hb_008021_040 Hb_002641_140--Hb_000411_020 Hb_189208_050 Hb_189208_050 Hb_002641_140--Hb_189208_050 Hb_005357_120 Hb_005357_120 Hb_002641_140--Hb_005357_120 Hb_012787_060 Hb_012787_060 Hb_002641_140--Hb_012787_060 Hb_003092_020 Hb_003092_020 Hb_000365_430--Hb_003092_020 Hb_009189_100 Hb_009189_100 Hb_000365_430--Hb_009189_100 Hb_001936_180 Hb_001936_180 Hb_000365_430--Hb_001936_180 Hb_007290_050 Hb_007290_050 Hb_000365_430--Hb_007290_050 Hb_000365_430--Hb_000329_720 Hb_000631_100 Hb_000631_100 Hb_000411_020--Hb_000631_100 Hb_000411_020--Hb_189208_050 Hb_003216_140 Hb_003216_140 Hb_000411_020--Hb_003216_140 Hb_000411_020--Hb_005357_120 Hb_000742_130--Hb_000645_160 Hb_002518_220 Hb_002518_220 Hb_000742_130--Hb_002518_220 Hb_006120_210 Hb_006120_210 Hb_000742_130--Hb_006120_210 Hb_000742_130--Hb_000329_720 Hb_032920_030 Hb_032920_030 Hb_000645_160--Hb_032920_030 Hb_000645_160--Hb_001936_180 Hb_001138_070 Hb_001138_070 Hb_000645_160--Hb_001138_070 Hb_149055_010 Hb_149055_010 Hb_000645_160--Hb_149055_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0208352 8.27613 13.7125 21.9106 0 0.0346705
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0600565 0 6.7661 6.41866

CAGE analysis