Hb_002522_040

Information

Type -
Description -
Location Contig2522: 106963-109932
Sequence    

Annotation

kegg
ID pop:POPTR_0204s00240g
description hypothetical protein
nr
ID KDP46608.1
description hypothetical protein JCGZ_04542 [Jatropha curcas]
swissprot
ID C0LGQ5
description LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1
trembl
ID A0A067LGY2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04542 PE=4 SV=1
Gene Ontology
ID GO:0003824
description lrr receptor-like serine threonine-protein kinase gso2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002522_040 0.0 - - hypothetical protein JCGZ_04542 [Jatropha curcas]
2 Hb_092975_010 0.0724770839 - - hypothetical protein JCGZ_04359 [Jatropha curcas]
3 Hb_122951_010 0.0745129546 - - PREDICTED: uncharacterized protein LOC105639235 [Jatropha curcas]
4 Hb_004031_050 0.0889609616 - - sinapyl alcohol dehydrogenase-like protein [Populus tremula x Populus tremuloides]
5 Hb_001117_180 0.0945750546 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
6 Hb_153180_010 0.0973256823 - - NBS-LRR disease resistance protein NBS49 [Dimocarpus longan]
7 Hb_178049_010 0.1035201218 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
8 Hb_120040_010 0.1052461532 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
9 Hb_002171_020 0.109784666 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]
10 Hb_001198_180 0.1135187491 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
11 Hb_008725_020 0.1155927713 - - PREDICTED: cytidine deaminase 1 [Jatropha curcas]
12 Hb_000571_060 0.1162772277 - - PREDICTED: uncharacterized protein LOC105648112 [Jatropha curcas]
13 Hb_002518_020 0.1167172755 - - PREDICTED: uncharacterized protein LOC105631164 [Jatropha curcas]
14 Hb_008021_050 0.1174212973 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_043630_030 0.1188371035 - - leucine-rich repeat transmembrane protein kinase [Populus trichocarpa]
16 Hb_002811_110 0.1189830003 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
17 Hb_000834_130 0.1234592937 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005214_050 0.1240871129 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
19 Hb_002897_030 0.1242156869 - - PREDICTED: methylesterase 17 [Jatropha curcas]
20 Hb_154038_040 0.1244572738 - - nutrient reservoir, putative [Ricinus communis]

Gene co-expression network

sample Hb_002522_040 Hb_002522_040 Hb_092975_010 Hb_092975_010 Hb_002522_040--Hb_092975_010 Hb_122951_010 Hb_122951_010 Hb_002522_040--Hb_122951_010 Hb_004031_050 Hb_004031_050 Hb_002522_040--Hb_004031_050 Hb_001117_180 Hb_001117_180 Hb_002522_040--Hb_001117_180 Hb_153180_010 Hb_153180_010 Hb_002522_040--Hb_153180_010 Hb_178049_010 Hb_178049_010 Hb_002522_040--Hb_178049_010 Hb_000098_260 Hb_000098_260 Hb_092975_010--Hb_000098_260 Hb_000329_720 Hb_000329_720 Hb_092975_010--Hb_000329_720 Hb_000742_130 Hb_000742_130 Hb_092975_010--Hb_000742_130 Hb_002171_020 Hb_002171_020 Hb_092975_010--Hb_002171_020 Hb_004634_030 Hb_004634_030 Hb_092975_010--Hb_004634_030 Hb_043630_030 Hb_043630_030 Hb_122951_010--Hb_043630_030 Hb_017862_030 Hb_017862_030 Hb_122951_010--Hb_017862_030 Hb_005111_020 Hb_005111_020 Hb_122951_010--Hb_005111_020 Hb_000849_030 Hb_000849_030 Hb_122951_010--Hb_000849_030 Hb_000020_210 Hb_000020_210 Hb_122951_010--Hb_000020_210 Hb_005214_050 Hb_005214_050 Hb_004031_050--Hb_005214_050 Hb_011355_020 Hb_011355_020 Hb_004031_050--Hb_011355_020 Hb_002897_030 Hb_002897_030 Hb_004031_050--Hb_002897_030 Hb_006026_020 Hb_006026_020 Hb_004031_050--Hb_006026_020 Hb_001198_180 Hb_001198_180 Hb_004031_050--Hb_001198_180 Hb_154038_040 Hb_154038_040 Hb_001117_180--Hb_154038_040 Hb_002811_110 Hb_002811_110 Hb_001117_180--Hb_002811_110 Hb_027405_010 Hb_027405_010 Hb_001117_180--Hb_027405_010 Hb_000162_070 Hb_000162_070 Hb_001117_180--Hb_000162_070 Hb_002592_070 Hb_002592_070 Hb_001117_180--Hb_002592_070 Hb_030827_080 Hb_030827_080 Hb_153180_010--Hb_030827_080 Hb_002739_160 Hb_002739_160 Hb_153180_010--Hb_002739_160 Hb_001856_130 Hb_001856_130 Hb_153180_010--Hb_001856_130 Hb_153180_010--Hb_001198_180 Hb_008725_020 Hb_008725_020 Hb_153180_010--Hb_008725_020 Hb_178049_010--Hb_002171_020 Hb_005648_020 Hb_005648_020 Hb_178049_010--Hb_005648_020 Hb_003466_010 Hb_003466_010 Hb_178049_010--Hb_003466_010 Hb_178049_010--Hb_122951_010 Hb_009736_020 Hb_009736_020 Hb_178049_010--Hb_009736_020 Hb_004558_060 Hb_004558_060 Hb_178049_010--Hb_004558_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0508065 0.0579281 0.179142 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0265094 0.0352809

CAGE analysis