Hb_002897_030

Information

Type -
Description -
Location Contig2897: 31079-33158
Sequence    

Annotation

kegg
ID pop:POPTR_0019s08980g
description hydrolase family protein
nr
ID XP_012091114.1
description PREDICTED: methylesterase 17 [Jatropha curcas]
swissprot
ID Q9SG92
description Methylesterase 17 OS=Arabidopsis thaliana GN=MES17 PE=1 SV=1
trembl
ID A0A067JCR7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03297 PE=4 SV=1
Gene Ontology
ID GO:0080030
description methylesterase 17

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30317: 31082-32982
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002897_030 0.0 - - PREDICTED: methylesterase 17 [Jatropha curcas]
2 Hb_011355_020 0.0651932781 - - extensin, proline-rich protein, putative [Ricinus communis]
3 Hb_001198_180 0.0745337975 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
4 Hb_004031_050 0.0834310646 - - sinapyl alcohol dehydrogenase-like protein [Populus tremula x Populus tremuloides]
5 Hb_004659_100 0.0935563506 - - conserved hypothetical protein [Ricinus communis]
6 Hb_006026_020 0.0995971035 - - PREDICTED: BTB/POZ domain-containing protein At5g48800 [Jatropha curcas]
7 Hb_005214_050 0.1071578136 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
8 Hb_000571_060 0.1081688178 - - PREDICTED: uncharacterized protein LOC105648112 [Jatropha curcas]
9 Hb_000149_020 0.1138411579 - - Proline-rich receptor-like protein kinase PERK14 [Glycine soja]
10 Hb_000373_260 0.1160477539 - - hypothetical protein POPTR_0002s06820g [Populus trichocarpa]
11 Hb_001562_030 0.1168716576 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
12 Hb_038718_010 0.1188065803 - - Disease resistance protein RFL1, putative [Ricinus communis]
13 Hb_008725_020 0.1199309029 - - PREDICTED: cytidine deaminase 1 [Jatropha curcas]
14 Hb_002811_110 0.120718415 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
15 Hb_002325_050 0.120830079 transcription factor TF Family: MYB MYB transcriptional factor [Populus nigra]
16 Hb_010642_010 0.121125793 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
17 Hb_024868_010 0.1227110779 - - protein kinase, putative [Ricinus communis]
18 Hb_002522_040 0.1242156869 - - hypothetical protein JCGZ_04542 [Jatropha curcas]
19 Hb_030827_080 0.1254906501 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
20 Hb_189208_050 0.1270941637 - - PREDICTED: uncharacterized protein LOC105642694 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_002897_030 Hb_002897_030 Hb_011355_020 Hb_011355_020 Hb_002897_030--Hb_011355_020 Hb_001198_180 Hb_001198_180 Hb_002897_030--Hb_001198_180 Hb_004031_050 Hb_004031_050 Hb_002897_030--Hb_004031_050 Hb_004659_100 Hb_004659_100 Hb_002897_030--Hb_004659_100 Hb_006026_020 Hb_006026_020 Hb_002897_030--Hb_006026_020 Hb_005214_050 Hb_005214_050 Hb_002897_030--Hb_005214_050 Hb_011355_020--Hb_006026_020 Hb_011355_020--Hb_004031_050 Hb_011355_020--Hb_001198_180 Hb_011355_020--Hb_005214_050 Hb_000373_260 Hb_000373_260 Hb_011355_020--Hb_000373_260 Hb_001562_030 Hb_001562_030 Hb_001198_180--Hb_001562_030 Hb_030827_080 Hb_030827_080 Hb_001198_180--Hb_030827_080 Hb_002739_160 Hb_002739_160 Hb_001198_180--Hb_002739_160 Hb_008725_020 Hb_008725_020 Hb_001198_180--Hb_008725_020 Hb_004031_050--Hb_005214_050 Hb_002522_040 Hb_002522_040 Hb_004031_050--Hb_002522_040 Hb_004031_050--Hb_006026_020 Hb_004031_050--Hb_001198_180 Hb_033053_020 Hb_033053_020 Hb_004659_100--Hb_033053_020 Hb_009627_020 Hb_009627_020 Hb_004659_100--Hb_009627_020 Hb_024868_010 Hb_024868_010 Hb_004659_100--Hb_024868_010 Hb_002325_050 Hb_002325_050 Hb_004659_100--Hb_002325_050 Hb_009838_120 Hb_009838_120 Hb_004659_100--Hb_009838_120 Hb_004970_100 Hb_004970_100 Hb_006026_020--Hb_004970_100 Hb_006026_020--Hb_000373_260 Hb_000149_020 Hb_000149_020 Hb_006026_020--Hb_000149_020 Hb_005214_050--Hb_000373_260 Hb_000568_020 Hb_000568_020 Hb_005214_050--Hb_000568_020 Hb_005214_050--Hb_004970_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0391124 9.89979 7.96966 28.0015 0 0.0172026
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 6.57634 2.24584

CAGE analysis