Hb_033053_020

Information

Type -
Description -
Location Contig33053: 2790-3425
Sequence    

Annotation

kegg
ID pop:POPTR_0014s011201
description hypothetical protein
nr
ID KDP44704.1
description hypothetical protein JCGZ_01204 [Jatropha curcas]
swissprot
ID Q9SX38
description Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana GN=At1g50180 PE=3 SV=2
trembl
ID A0A067LK89
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01204 PE=4 SV=1
Gene Ontology
ID GO:0032550
description cc-nbs-lrr resistance

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34742: 2515-3484
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033053_020 0.0 - - hypothetical protein JCGZ_01204 [Jatropha curcas]
2 Hb_004659_100 0.0718166995 - - conserved hypothetical protein [Ricinus communis]
3 Hb_087427_010 0.0950174309 - - hypothetical protein PRUPE_ppa007748mg [Prunus persica]
4 Hb_004631_100 0.0997433708 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH96 [Jatropha curcas]
5 Hb_000631_100 0.1137818109 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Jatropha curcas]
6 Hb_038718_010 0.1175609614 - - Disease resistance protein RFL1, putative [Ricinus communis]
7 Hb_008021_040 0.1188023282 - - PREDICTED: AP2-like ethylene-responsive transcription factor ANT [Jatropha curcas]
8 Hb_002888_100 0.1197062791 - - PREDICTED: uncharacterized protein LOC103699074, partial [Phoenix dactylifera]
9 Hb_009627_020 0.1230513407 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
10 Hb_024868_010 0.1236647781 - - protein kinase, putative [Ricinus communis]
11 Hb_009838_120 0.1245082049 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA13 isoform X1 [Jatropha curcas]
12 Hb_001198_180 0.125813764 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
13 Hb_001562_030 0.1261667107 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
14 Hb_003529_240 0.1277466948 transcription factor TF Family: AP2 PREDICTED: ethylene-responsive transcription factor RAP2-7-like isoform X2 [Gossypium raimondii]
15 Hb_002897_030 0.1295352553 - - PREDICTED: methylesterase 17 [Jatropha curcas]
16 Hb_002325_050 0.1301035653 transcription factor TF Family: MYB MYB transcriptional factor [Populus nigra]
17 Hb_002676_110 0.1315614091 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Gossypium raimondii]
18 Hb_001048_070 0.1349456428 transcription factor TF Family: HB hypothetical protein POPTR_0007s14590g [Populus trichocarpa]
19 Hb_170632_010 0.1372322514 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
20 Hb_000563_630 0.138724889 - - PREDICTED: uncharacterized protein LOC105643442 [Jatropha curcas]

Gene co-expression network

sample Hb_033053_020 Hb_033053_020 Hb_004659_100 Hb_004659_100 Hb_033053_020--Hb_004659_100 Hb_087427_010 Hb_087427_010 Hb_033053_020--Hb_087427_010 Hb_004631_100 Hb_004631_100 Hb_033053_020--Hb_004631_100 Hb_000631_100 Hb_000631_100 Hb_033053_020--Hb_000631_100 Hb_038718_010 Hb_038718_010 Hb_033053_020--Hb_038718_010 Hb_008021_040 Hb_008021_040 Hb_033053_020--Hb_008021_040 Hb_009627_020 Hb_009627_020 Hb_004659_100--Hb_009627_020 Hb_002897_030 Hb_002897_030 Hb_004659_100--Hb_002897_030 Hb_024868_010 Hb_024868_010 Hb_004659_100--Hb_024868_010 Hb_002325_050 Hb_002325_050 Hb_004659_100--Hb_002325_050 Hb_009838_120 Hb_009838_120 Hb_004659_100--Hb_009838_120 Hb_087427_010--Hb_000631_100 Hb_189208_050 Hb_189208_050 Hb_087427_010--Hb_189208_050 Hb_087427_010--Hb_008021_040 Hb_087427_010--Hb_024868_010 Hb_006916_120 Hb_006916_120 Hb_087427_010--Hb_006916_120 Hb_002676_110 Hb_002676_110 Hb_004631_100--Hb_002676_110 Hb_000060_080 Hb_000060_080 Hb_004631_100--Hb_000060_080 Hb_002888_100 Hb_002888_100 Hb_004631_100--Hb_002888_100 Hb_004631_100--Hb_004659_100 Hb_000111_120 Hb_000111_120 Hb_004631_100--Hb_000111_120 Hb_000411_020 Hb_000411_020 Hb_000631_100--Hb_000411_020 Hb_000631_100--Hb_189208_050 Hb_000631_100--Hb_024868_010 Hb_002641_140 Hb_002641_140 Hb_000631_100--Hb_002641_140 Hb_000631_100--Hb_008021_040 Hb_000128_090 Hb_000128_090 Hb_038718_010--Hb_000128_090 Hb_010642_010 Hb_010642_010 Hb_038718_010--Hb_010642_010 Hb_002035_020 Hb_002035_020 Hb_038718_010--Hb_002035_020 Hb_170632_010 Hb_170632_010 Hb_038718_010--Hb_170632_010 Hb_011355_020 Hb_011355_020 Hb_038718_010--Hb_011355_020 Hb_008021_040--Hb_002641_140 Hb_139461_010 Hb_139461_010 Hb_008021_040--Hb_139461_010 Hb_008021_040--Hb_189208_050 Hb_008021_040--Hb_024868_010 Hb_001048_070 Hb_001048_070 Hb_008021_040--Hb_001048_070 Hb_029142_040 Hb_029142_040 Hb_008021_040--Hb_029142_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.191949 2.91423 2.64326 5.77018 0.115395 0.0355878
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.87631 0.569056

CAGE analysis