Hb_000128_090

Information

Type -
Description -
Location Contig128: 200544-201844
Sequence    

Annotation

kegg
ID rcu:RCOM_0770830
description Reticuline oxidase precursor, putative (EC:1.21.3.3)
nr
ID XP_002529891.1
description Reticuline oxidase precursor, putative [Ricinus communis]
swissprot
ID Q9SVG4
description Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2
trembl
ID B9SV72
description Reticuline oxidase, putative OS=Ricinus communis GN=RCOM_0770830 PE=4 SV=1
Gene Ontology
ID GO:0008762
description reticuline oxidase-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08671: 201084-202047
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000128_090 0.0 - - Reticuline oxidase precursor, putative [Ricinus communis]
2 Hb_038718_010 0.0819056886 - - Disease resistance protein RFL1, putative [Ricinus communis]
3 Hb_148914_020 0.0851725329 - - PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
4 Hb_145268_010 0.0998941162 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
5 Hb_001213_080 0.104055819 - - PREDICTED: tubulin beta chain-like [Jatropha curcas]
6 Hb_010642_010 0.1042088967 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
7 Hb_048937_010 0.1093143325 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1 [Nelumbo nucifera]
8 Hb_002035_020 0.1165227703 transcription factor TF Family: TRAF hypothetical protein B456_011G050200 [Gossypium raimondii]
9 Hb_003939_090 0.1192404722 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
10 Hb_011355_020 0.1207983223 - - extensin, proline-rich protein, putative [Ricinus communis]
11 Hb_007313_050 0.1215584825 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
12 Hb_170632_010 0.1247793509 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
13 Hb_004096_140 0.1268032059 - - Lipase, putative [Ricinus communis]
14 Hb_030827_080 0.1302102094 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
15 Hb_002897_030 0.133095029 - - PREDICTED: methylesterase 17 [Jatropha curcas]
16 Hb_000172_310 0.1338891712 - - PREDICTED: fasciclin-like arabinogalactan protein 21 [Jatropha curcas]
17 Hb_002894_040 0.1340449036 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004218_220 0.135343193 - - o-methyltransferase, putative [Ricinus communis]
19 Hb_001198_180 0.1365432299 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
20 Hb_001019_140 0.1381244444 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000128_090 Hb_000128_090 Hb_038718_010 Hb_038718_010 Hb_000128_090--Hb_038718_010 Hb_148914_020 Hb_148914_020 Hb_000128_090--Hb_148914_020 Hb_145268_010 Hb_145268_010 Hb_000128_090--Hb_145268_010 Hb_001213_080 Hb_001213_080 Hb_000128_090--Hb_001213_080 Hb_010642_010 Hb_010642_010 Hb_000128_090--Hb_010642_010 Hb_048937_010 Hb_048937_010 Hb_000128_090--Hb_048937_010 Hb_038718_010--Hb_010642_010 Hb_002035_020 Hb_002035_020 Hb_038718_010--Hb_002035_020 Hb_170632_010 Hb_170632_010 Hb_038718_010--Hb_170632_010 Hb_011355_020 Hb_011355_020 Hb_038718_010--Hb_011355_020 Hb_033053_020 Hb_033053_020 Hb_038718_010--Hb_033053_020 Hb_148914_020--Hb_001213_080 Hb_005900_020 Hb_005900_020 Hb_148914_020--Hb_005900_020 Hb_007313_050 Hb_007313_050 Hb_148914_020--Hb_007313_050 Hb_072670_010 Hb_072670_010 Hb_148914_020--Hb_072670_010 Hb_106728_020 Hb_106728_020 Hb_148914_020--Hb_106728_020 Hb_145268_010--Hb_048937_010 Hb_008352_020 Hb_008352_020 Hb_145268_010--Hb_008352_020 Hb_145268_010--Hb_010642_010 Hb_001019_140 Hb_001019_140 Hb_145268_010--Hb_001019_140 Hb_001663_090 Hb_001663_090 Hb_145268_010--Hb_001663_090 Hb_001213_080--Hb_007313_050 Hb_001059_050 Hb_001059_050 Hb_001213_080--Hb_001059_050 Hb_000286_210 Hb_000286_210 Hb_001213_080--Hb_000286_210 Hb_001213_080--Hb_048937_010 Hb_030827_080 Hb_030827_080 Hb_010642_010--Hb_030827_080 Hb_002739_160 Hb_002739_160 Hb_010642_010--Hb_002739_160 Hb_010642_010--Hb_008352_020 Hb_003939_090 Hb_003939_090 Hb_010642_010--Hb_003939_090 Hb_001198_180 Hb_001198_180 Hb_010642_010--Hb_001198_180 Hb_048937_010--Hb_001019_140 Hb_004096_140 Hb_004096_140 Hb_048937_010--Hb_004096_140 Hb_048937_010--Hb_002035_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.71431 1.44978 5.1224 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.905166 0.0715518

CAGE analysis