Hb_145268_010

Information

Type -
Description -
Location Contig145268: 1828-6620
Sequence    

Annotation

kegg
ID rcu:RCOM_1494360
description ATP binding protein, putative (EC:2.7.11.25)
nr
ID XP_012073359.1
description PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
swissprot
ID Q1PEM5
description Proline-rich receptor-like protein kinase PERK3 OS=Arabidopsis thaliana GN=PERK3 PE=2 SV=2
trembl
ID A0A067KMC0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06288 PE=3 SV=1
Gene Ontology
ID GO:0004672
description proline-rich receptor-like protein kinase perk1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_145268_010 0.0 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
2 Hb_048937_010 0.0739369807 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1 [Nelumbo nucifera]
3 Hb_000128_090 0.0998941162 - - Reticuline oxidase precursor, putative [Ricinus communis]
4 Hb_008352_020 0.100636512 - - hypothetical protein [Cecembia lonarensis]
5 Hb_010642_010 0.1037432361 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
6 Hb_001019_140 0.1067644599 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
7 Hb_001663_090 0.1118790325 - - ribonuclease t2, putative [Ricinus communis]
8 Hb_004096_140 0.1188013659 - - Lipase, putative [Ricinus communis]
9 Hb_030827_080 0.1228022767 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
10 Hb_001213_080 0.1230077128 - - PREDICTED: tubulin beta chain-like [Jatropha curcas]
11 Hb_006573_060 0.1259342686 - - hypothetical protein [Bruguiera gymnorhiza]
12 Hb_002049_030 0.1276748946 - - PREDICTED: uncharacterized protein LOC105635940 isoform X3 [Jatropha curcas]
13 Hb_138705_010 0.1282198554 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
14 Hb_005389_090 0.1290779248 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA27, putative [Ricinus communis]
15 Hb_003939_090 0.1297211841 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
16 Hb_038718_010 0.1303615662 - - Disease resistance protein RFL1, putative [Ricinus communis]
17 Hb_007313_050 0.1315939756 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
18 Hb_002739_160 0.1322294729 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
19 Hb_000991_110 0.134185346 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
20 Hb_029622_090 0.1355766831 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_145268_010 Hb_145268_010 Hb_048937_010 Hb_048937_010 Hb_145268_010--Hb_048937_010 Hb_000128_090 Hb_000128_090 Hb_145268_010--Hb_000128_090 Hb_008352_020 Hb_008352_020 Hb_145268_010--Hb_008352_020 Hb_010642_010 Hb_010642_010 Hb_145268_010--Hb_010642_010 Hb_001019_140 Hb_001019_140 Hb_145268_010--Hb_001019_140 Hb_001663_090 Hb_001663_090 Hb_145268_010--Hb_001663_090 Hb_048937_010--Hb_001019_140 Hb_004096_140 Hb_004096_140 Hb_048937_010--Hb_004096_140 Hb_001213_080 Hb_001213_080 Hb_048937_010--Hb_001213_080 Hb_048937_010--Hb_000128_090 Hb_002035_020 Hb_002035_020 Hb_048937_010--Hb_002035_020 Hb_038718_010 Hb_038718_010 Hb_000128_090--Hb_038718_010 Hb_148914_020 Hb_148914_020 Hb_000128_090--Hb_148914_020 Hb_000128_090--Hb_001213_080 Hb_000128_090--Hb_010642_010 Hb_030827_080 Hb_030827_080 Hb_008352_020--Hb_030827_080 Hb_002739_160 Hb_002739_160 Hb_008352_020--Hb_002739_160 Hb_008352_020--Hb_010642_010 Hb_000028_330 Hb_000028_330 Hb_008352_020--Hb_000028_330 Hb_008352_020--Hb_001663_090 Hb_010642_010--Hb_030827_080 Hb_010642_010--Hb_002739_160 Hb_010642_010--Hb_038718_010 Hb_003939_090 Hb_003939_090 Hb_010642_010--Hb_003939_090 Hb_001198_180 Hb_001198_180 Hb_010642_010--Hb_001198_180 Hb_138705_010 Hb_138705_010 Hb_001019_140--Hb_138705_010 Hb_002049_030 Hb_002049_030 Hb_001019_140--Hb_002049_030 Hb_001019_140--Hb_004096_140 Hb_003968_010 Hb_003968_010 Hb_001019_140--Hb_003968_010 Hb_029622_090 Hb_029622_090 Hb_001663_090--Hb_029622_090 Hb_002676_110 Hb_002676_110 Hb_001663_090--Hb_002676_110 Hb_001663_090--Hb_000028_330 Hb_001663_090--Hb_002739_160 Hb_000060_080 Hb_000060_080 Hb_001663_090--Hb_000060_080 Hb_001663_090--Hb_030827_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.62773 2.61072 6.95303 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.853381 0.172801

CAGE analysis