Hb_008352_020

Information

Type -
Description -
Location Contig8352: 45943-46185
Sequence    

Annotation

kegg
ID sot:102596609
description uncharacterized LOC102596609
nr
ID WP_040401510.1
description hypothetical protein [Cecembia lonarensis]
swissprot
ID -
description -
trembl
ID K1KXQ8
description Uncharacterized protein OS=Cecembia lonarensis LW9 GN=B879_04163 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008352_020 0.0 - - hypothetical protein [Cecembia lonarensis]
2 Hb_030827_080 0.0654524522 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
3 Hb_002739_160 0.0720685482 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
4 Hb_010642_010 0.0750932093 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
5 Hb_145268_010 0.100636512 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
6 Hb_000028_330 0.1023985267 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
7 Hb_001663_090 0.1067331526 - - ribonuclease t2, putative [Ricinus communis]
8 Hb_153180_010 0.1073825767 - - NBS-LRR disease resistance protein NBS49 [Dimocarpus longan]
9 Hb_026048_030 0.1078839557 - - conserved hypothetical protein [Ricinus communis]
10 Hb_029622_090 0.1124680852 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
11 Hb_001518_030 0.113749487 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
12 Hb_000714_070 0.119002257 transcription factor TF Family: LOB hypothetical protein JCGZ_14754 [Jatropha curcas]
13 Hb_004324_100 0.1216464951 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
14 Hb_003435_040 0.1230732567 - - tonoplast intrinsic protein [Hevea brasiliensis]
15 Hb_000120_600 0.1241524521 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
16 Hb_002804_070 0.1273641807 - - hypothetical protein JCGZ_05701 [Jatropha curcas]
17 Hb_017549_010 0.1281561952 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00222 [Jatropha curcas]
18 Hb_001856_130 0.1300132382 - - hypothetical protein CISIN_1g022795mg [Citrus sinensis]
19 Hb_006573_060 0.1300750571 - - hypothetical protein [Bruguiera gymnorhiza]
20 Hb_003939_090 0.1316901573 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_008352_020 Hb_008352_020 Hb_030827_080 Hb_030827_080 Hb_008352_020--Hb_030827_080 Hb_002739_160 Hb_002739_160 Hb_008352_020--Hb_002739_160 Hb_010642_010 Hb_010642_010 Hb_008352_020--Hb_010642_010 Hb_145268_010 Hb_145268_010 Hb_008352_020--Hb_145268_010 Hb_000028_330 Hb_000028_330 Hb_008352_020--Hb_000028_330 Hb_001663_090 Hb_001663_090 Hb_008352_020--Hb_001663_090 Hb_030827_080--Hb_002739_160 Hb_030827_080--Hb_010642_010 Hb_153180_010 Hb_153180_010 Hb_030827_080--Hb_153180_010 Hb_001198_180 Hb_001198_180 Hb_030827_080--Hb_001198_180 Hb_030827_080--Hb_001663_090 Hb_002739_160--Hb_153180_010 Hb_002739_160--Hb_010642_010 Hb_002739_160--Hb_001198_180 Hb_002739_160--Hb_001663_090 Hb_038718_010 Hb_038718_010 Hb_010642_010--Hb_038718_010 Hb_003939_090 Hb_003939_090 Hb_010642_010--Hb_003939_090 Hb_010642_010--Hb_001198_180 Hb_048937_010 Hb_048937_010 Hb_145268_010--Hb_048937_010 Hb_000128_090 Hb_000128_090 Hb_145268_010--Hb_000128_090 Hb_145268_010--Hb_010642_010 Hb_001019_140 Hb_001019_140 Hb_145268_010--Hb_001019_140 Hb_145268_010--Hb_001663_090 Hb_001198_160 Hb_001198_160 Hb_000028_330--Hb_001198_160 Hb_001610_070 Hb_001610_070 Hb_000028_330--Hb_001610_070 Hb_006736_040 Hb_006736_040 Hb_000028_330--Hb_006736_040 Hb_001518_030 Hb_001518_030 Hb_000028_330--Hb_001518_030 Hb_029622_090 Hb_029622_090 Hb_000028_330--Hb_029622_090 Hb_026048_030 Hb_026048_030 Hb_000028_330--Hb_026048_030 Hb_001663_090--Hb_029622_090 Hb_002676_110 Hb_002676_110 Hb_001663_090--Hb_002676_110 Hb_001663_090--Hb_000028_330 Hb_000060_080 Hb_000060_080 Hb_001663_090--Hb_000060_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 9.98687 4.79981 14.2506 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.22915 1.45448

CAGE analysis