Hb_029622_090

Information

Type transcription factor
Description TF Family: ERF
Location Contig29622: 52150-52899
Sequence    

Annotation

kegg
ID rcu:RCOM_1502120
description Ethylene-responsive transcription factor, putative
nr
ID XP_012090506.1
description PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
swissprot
ID Q9LW50
description Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1
trembl
ID A0A067JSE3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26300 PE=4 SV=1
Gene Ontology
ID GO:0009987
description ethylene-responsive transcription factor 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029622_090 0.0 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
2 Hb_001663_090 0.0594302209 - - ribonuclease t2, putative [Ricinus communis]
3 Hb_000028_330 0.082772954 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
4 Hb_002048_070 0.0930364635 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
5 Hb_011915_020 0.0985404928 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Jatropha curcas]
6 Hb_021576_160 0.1016605819 transcription factor TF Family: WRKY putative WRKY transcription factor family protein [Populus trichocarpa]
7 Hb_004324_100 0.1085702211 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
8 Hb_001610_070 0.1104018744 - - hypothetical protein MIMGU_mgv1a022867mg [Erythranthe guttata]
9 Hb_001518_030 0.1114621133 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
10 Hb_076771_010 0.1121924621 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
11 Hb_008352_020 0.1124680852 - - hypothetical protein [Cecembia lonarensis]
12 Hb_010721_010 0.1127994378 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
13 Hb_002739_160 0.1130272111 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
14 Hb_002676_110 0.1172064359 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Gossypium raimondii]
15 Hb_001198_160 0.120036828 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
16 Hb_030827_080 0.1200978197 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
17 Hb_001221_050 0.1211747428 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Jatropha curcas]
18 Hb_023386_060 0.1213073984 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
19 Hb_026048_030 0.1257356746 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003427_020 0.1263613301 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_029622_090 Hb_029622_090 Hb_001663_090 Hb_001663_090 Hb_029622_090--Hb_001663_090 Hb_000028_330 Hb_000028_330 Hb_029622_090--Hb_000028_330 Hb_002048_070 Hb_002048_070 Hb_029622_090--Hb_002048_070 Hb_011915_020 Hb_011915_020 Hb_029622_090--Hb_011915_020 Hb_021576_160 Hb_021576_160 Hb_029622_090--Hb_021576_160 Hb_004324_100 Hb_004324_100 Hb_029622_090--Hb_004324_100 Hb_002676_110 Hb_002676_110 Hb_001663_090--Hb_002676_110 Hb_001663_090--Hb_000028_330 Hb_002739_160 Hb_002739_160 Hb_001663_090--Hb_002739_160 Hb_000060_080 Hb_000060_080 Hb_001663_090--Hb_000060_080 Hb_030827_080 Hb_030827_080 Hb_001663_090--Hb_030827_080 Hb_001198_160 Hb_001198_160 Hb_000028_330--Hb_001198_160 Hb_001610_070 Hb_001610_070 Hb_000028_330--Hb_001610_070 Hb_006736_040 Hb_006736_040 Hb_000028_330--Hb_006736_040 Hb_001518_030 Hb_001518_030 Hb_000028_330--Hb_001518_030 Hb_026048_030 Hb_026048_030 Hb_000028_330--Hb_026048_030 Hb_023386_060 Hb_023386_060 Hb_002048_070--Hb_023386_060 Hb_000465_350 Hb_000465_350 Hb_002048_070--Hb_000465_350 Hb_010721_010 Hb_010721_010 Hb_002048_070--Hb_010721_010 Hb_002048_070--Hb_001663_090 Hb_002048_070--Hb_011915_020 Hb_011915_020--Hb_001610_070 Hb_002374_030 Hb_002374_030 Hb_011915_020--Hb_002374_030 Hb_011915_020--Hb_001198_160 Hb_011915_020--Hb_010721_010 Hb_003427_020 Hb_003427_020 Hb_021576_160--Hb_003427_020 Hb_001221_050 Hb_001221_050 Hb_021576_160--Hb_001221_050 Hb_006153_020 Hb_006153_020 Hb_021576_160--Hb_006153_020 Hb_001333_030 Hb_001333_030 Hb_021576_160--Hb_001333_030 Hb_005946_200 Hb_005946_200 Hb_021576_160--Hb_005946_200 Hb_004324_100--Hb_000028_330 Hb_004324_100--Hb_002739_160 Hb_004324_100--Hb_030827_080 Hb_004324_100--Hb_006736_040 Hb_003435_040 Hb_003435_040 Hb_004324_100--Hb_003435_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0401922 38.8251 29.9419 46.3988 0.0962344 0.193226
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.173573 0 3.68541 4.84497

CAGE analysis