Hb_004324_100

Information

Type -
Description -
Location Contig4324: 69836-72268
Sequence    

Annotation

kegg
ID rcu:RCOM_1580260
description trehalose-6-phosphate synthase, putative (EC:3.1.3.12)
nr
ID XP_002513579.1
description trehalose-6-phosphate synthase, putative [Ricinus communis]
swissprot
ID Q6H5L4
description Probable trehalose-phosphate phosphatase 7 OS=Oryza sativa subsp. japonica GN=TPP7 PE=2 SV=2
trembl
ID B9RIL0
description Trehalose 6-phosphate phosphatase OS=Ricinus communis GN=RCOM_1580260 PE=3 SV=1
Gene Ontology
ID GO:0004805
description probable trehalose-phosphate phosphatase c

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004324_100 0.0 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
2 Hb_000028_330 0.090430069 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
3 Hb_002739_160 0.0927700854 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
4 Hb_030827_080 0.1022439897 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
5 Hb_006736_040 0.1081657213 - - PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Populus euphratica]
6 Hb_029622_090 0.1085702211 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
7 Hb_003435_040 0.1121270701 - - tonoplast intrinsic protein [Hevea brasiliensis]
8 Hb_001663_090 0.1145500006 - - ribonuclease t2, putative [Ricinus communis]
9 Hb_008725_020 0.1159139727 - - PREDICTED: cytidine deaminase 1 [Jatropha curcas]
10 Hb_153180_010 0.1170620144 - - NBS-LRR disease resistance protein NBS49 [Dimocarpus longan]
11 Hb_001562_030 0.1174861073 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
12 Hb_001198_160 0.1177450722 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
13 Hb_004109_110 0.1193426716 - - dioxygenase family protein [Populus trichocarpa]
14 Hb_001610_070 0.1201992382 - - hypothetical protein MIMGU_mgv1a022867mg [Erythranthe guttata]
15 Hb_008352_020 0.1216464951 - - hypothetical protein [Cecembia lonarensis]
16 Hb_021576_160 0.1226398461 transcription factor TF Family: WRKY putative WRKY transcription factor family protein [Populus trichocarpa]
17 Hb_002048_070 0.1226407989 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
18 Hb_000010_220 0.1232016202 - - PREDICTED: uncharacterized protein LOC105640277 [Jatropha curcas]
19 Hb_024650_010 0.1243268947 - - PREDICTED: BAHD acyltransferase DCR [Jatropha curcas]
20 Hb_001198_180 0.1263110339 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]

Gene co-expression network

sample Hb_004324_100 Hb_004324_100 Hb_000028_330 Hb_000028_330 Hb_004324_100--Hb_000028_330 Hb_002739_160 Hb_002739_160 Hb_004324_100--Hb_002739_160 Hb_030827_080 Hb_030827_080 Hb_004324_100--Hb_030827_080 Hb_006736_040 Hb_006736_040 Hb_004324_100--Hb_006736_040 Hb_029622_090 Hb_029622_090 Hb_004324_100--Hb_029622_090 Hb_003435_040 Hb_003435_040 Hb_004324_100--Hb_003435_040 Hb_001198_160 Hb_001198_160 Hb_000028_330--Hb_001198_160 Hb_001610_070 Hb_001610_070 Hb_000028_330--Hb_001610_070 Hb_000028_330--Hb_006736_040 Hb_001518_030 Hb_001518_030 Hb_000028_330--Hb_001518_030 Hb_000028_330--Hb_029622_090 Hb_026048_030 Hb_026048_030 Hb_000028_330--Hb_026048_030 Hb_002739_160--Hb_030827_080 Hb_153180_010 Hb_153180_010 Hb_002739_160--Hb_153180_010 Hb_010642_010 Hb_010642_010 Hb_002739_160--Hb_010642_010 Hb_008352_020 Hb_008352_020 Hb_002739_160--Hb_008352_020 Hb_001198_180 Hb_001198_180 Hb_002739_160--Hb_001198_180 Hb_001663_090 Hb_001663_090 Hb_002739_160--Hb_001663_090 Hb_030827_080--Hb_010642_010 Hb_030827_080--Hb_008352_020 Hb_030827_080--Hb_153180_010 Hb_030827_080--Hb_001198_180 Hb_030827_080--Hb_001663_090 Hb_024650_010 Hb_024650_010 Hb_006736_040--Hb_024650_010 Hb_006736_040--Hb_003435_040 Hb_006736_040--Hb_001610_070 Hb_001013_080 Hb_001013_080 Hb_006736_040--Hb_001013_080 Hb_006736_040--Hb_001518_030 Hb_029622_090--Hb_001663_090 Hb_002048_070 Hb_002048_070 Hb_029622_090--Hb_002048_070 Hb_011915_020 Hb_011915_020 Hb_029622_090--Hb_011915_020 Hb_021576_160 Hb_021576_160 Hb_029622_090--Hb_021576_160 Hb_003435_040--Hb_024650_010 Hb_003435_040--Hb_001013_080 Hb_000991_080 Hb_000991_080 Hb_003435_040--Hb_000991_080 Hb_003849_200 Hb_003849_200 Hb_003435_040--Hb_003849_200 Hb_003435_040--Hb_001518_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.774856 0.596953 1.06984 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0296941 0 0.166352 0.184962

CAGE analysis