Hb_004096_140

Information

Type -
Description -
Location Contig4096: 140454-141488
Sequence    

Annotation

kegg
ID rcu:RCOM_1726020
description Lipase, putative
nr
ID XP_002516731.1
description Lipase, putative [Ricinus communis]
swissprot
ID Q9LFR7
description Probable carboxylesterase 17 OS=Arabidopsis thaliana GN=CXE17 PE=2 SV=1
trembl
ID B9RSL2
description Lipase, putative OS=Ricinus communis GN=RCOM_1726020 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable carboxylesterase 17

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004096_140 0.0 - - Lipase, putative [Ricinus communis]
2 Hb_001019_140 0.0827505144 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
3 Hb_006721_060 0.0889269369 - - RnaseH (mitochondrion) [Malus domestica]
4 Hb_048937_010 0.09123738 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1 [Nelumbo nucifera]
5 Hb_003968_010 0.0935872809 - - UDP-glucosyltransferase, putative [Ricinus communis]
6 Hb_138705_010 0.1125194521 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
7 Hb_000060_080 0.1136615406 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 2 protein, putative [Ricinus communis]
8 Hb_000635_190 0.1137348105 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103322127 [Prunus mume]
9 Hb_002035_020 0.1167915128 transcription factor TF Family: TRAF hypothetical protein B456_011G050200 [Gossypium raimondii]
10 Hb_145268_010 0.1188013659 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
11 Hb_170632_010 0.1222779731 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
12 Hb_000172_310 0.1260530336 - - PREDICTED: fasciclin-like arabinogalactan protein 21 [Jatropha curcas]
13 Hb_000128_090 0.1268032059 - - Reticuline oxidase precursor, putative [Ricinus communis]
14 Hb_096878_010 0.1386579888 - - hypothetical protein POPTR_0112s002001g, partial [Populus trichocarpa]
15 Hb_003050_170 0.13883143 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001663_090 0.1392570745 - - ribonuclease t2, putative [Ricinus communis]
17 Hb_004218_220 0.1398923658 - - o-methyltransferase, putative [Ricinus communis]
18 Hb_002049_030 0.1441487277 - - PREDICTED: uncharacterized protein LOC105635940 isoform X3 [Jatropha curcas]
19 Hb_038718_010 0.1504792763 - - Disease resistance protein RFL1, putative [Ricinus communis]
20 Hb_008725_030 0.1555258337 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_004096_140 Hb_004096_140 Hb_001019_140 Hb_001019_140 Hb_004096_140--Hb_001019_140 Hb_006721_060 Hb_006721_060 Hb_004096_140--Hb_006721_060 Hb_048937_010 Hb_048937_010 Hb_004096_140--Hb_048937_010 Hb_003968_010 Hb_003968_010 Hb_004096_140--Hb_003968_010 Hb_138705_010 Hb_138705_010 Hb_004096_140--Hb_138705_010 Hb_000060_080 Hb_000060_080 Hb_004096_140--Hb_000060_080 Hb_001019_140--Hb_138705_010 Hb_002049_030 Hb_002049_030 Hb_001019_140--Hb_002049_030 Hb_001019_140--Hb_048937_010 Hb_145268_010 Hb_145268_010 Hb_001019_140--Hb_145268_010 Hb_001019_140--Hb_003968_010 Hb_000635_190 Hb_000635_190 Hb_006721_060--Hb_000635_190 Hb_096878_010 Hb_096878_010 Hb_006721_060--Hb_096878_010 Hb_003050_170 Hb_003050_170 Hb_006721_060--Hb_003050_170 Hb_000172_310 Hb_000172_310 Hb_006721_060--Hb_000172_310 Hb_006721_060--Hb_000060_080 Hb_048937_010--Hb_145268_010 Hb_001213_080 Hb_001213_080 Hb_048937_010--Hb_001213_080 Hb_000128_090 Hb_000128_090 Hb_048937_010--Hb_000128_090 Hb_002035_020 Hb_002035_020 Hb_048937_010--Hb_002035_020 Hb_008725_030 Hb_008725_030 Hb_003968_010--Hb_008725_030 Hb_003968_010--Hb_138705_010 Hb_096974_010 Hb_096974_010 Hb_003968_010--Hb_096974_010 Hb_003968_010--Hb_003050_170 Hb_138705_010--Hb_002049_030 Hb_000996_100 Hb_000996_100 Hb_138705_010--Hb_000996_100 Hb_138705_010--Hb_048937_010 Hb_170632_010 Hb_170632_010 Hb_000060_080--Hb_170632_010 Hb_002676_110 Hb_002676_110 Hb_000060_080--Hb_002676_110 Hb_001663_090 Hb_001663_090 Hb_000060_080--Hb_001663_090 Hb_001562_030 Hb_001562_030 Hb_000060_080--Hb_001562_030 Hb_004631_100 Hb_004631_100 Hb_000060_080--Hb_004631_100 Hb_000975_090 Hb_000975_090 Hb_000060_080--Hb_000975_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.060193 0.0503533 0.0875749 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0153467 0

CAGE analysis