Hb_008725_030

Information

Type -
Description -
Location Contig8725: 19668-20279
Sequence    

Annotation

kegg
ID rcu:RCOM_1047710
description hypothetical protein
nr
ID XP_002514139.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9C889
description PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1
trembl
ID B9RK95
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1047710 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008725_030 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_003968_010 0.0701456049 - - UDP-glucosyltransferase, putative [Ricinus communis]
3 Hb_096974_010 0.0832535534 - - PREDICTED: uncharacterized protein LOC105123384 isoform X1 [Populus euphratica]
4 Hb_004544_010 0.084029054 - - PREDICTED: cytochrome P450 CYP749A22-like [Jatropha curcas]
5 Hb_043522_010 0.0924081046 - - -
6 Hb_003050_170 0.1063951284 - - conserved hypothetical protein [Ricinus communis]
7 Hb_004297_050 0.1079417483 - - cytochrome P450, putative [Ricinus communis]
8 Hb_001971_030 0.1229312727 - - PREDICTED: exonuclease 1 [Jatropha curcas]
9 Hb_004785_160 0.126380799 - - PREDICTED: U-box domain-containing protein 28-like [Jatropha curcas]
10 Hb_002973_070 0.1323434565 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 40 [Jatropha curcas]
11 Hb_023386_060 0.1365874148 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
12 Hb_008948_070 0.1393387096 - - PREDICTED: phospholipase D alpha 1-like isoform X1 [Jatropha curcas]
13 Hb_138705_010 0.1528407069 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
14 Hb_004096_140 0.1555258337 - - Lipase, putative [Ricinus communis]
15 Hb_000996_100 0.1587483792 - - Nucleotide binding, putative [Theobroma cacao]
16 Hb_000465_350 0.1604338579 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2 [Jatropha curcas]
17 Hb_001141_210 0.1621224954 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105632009 [Jatropha curcas]
18 Hb_160653_010 0.1671081412 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
19 Hb_000635_190 0.1684750827 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103322127 [Prunus mume]
20 Hb_002774_180 0.1693050809 - - trehalose-6-phosphate synthase, putative [Ricinus communis]

Gene co-expression network

sample Hb_008725_030 Hb_008725_030 Hb_003968_010 Hb_003968_010 Hb_008725_030--Hb_003968_010 Hb_096974_010 Hb_096974_010 Hb_008725_030--Hb_096974_010 Hb_004544_010 Hb_004544_010 Hb_008725_030--Hb_004544_010 Hb_043522_010 Hb_043522_010 Hb_008725_030--Hb_043522_010 Hb_003050_170 Hb_003050_170 Hb_008725_030--Hb_003050_170 Hb_004297_050 Hb_004297_050 Hb_008725_030--Hb_004297_050 Hb_004096_140 Hb_004096_140 Hb_003968_010--Hb_004096_140 Hb_138705_010 Hb_138705_010 Hb_003968_010--Hb_138705_010 Hb_003968_010--Hb_096974_010 Hb_003968_010--Hb_003050_170 Hb_001019_140 Hb_001019_140 Hb_003968_010--Hb_001019_140 Hb_096974_010--Hb_004297_050 Hb_008948_070 Hb_008948_070 Hb_096974_010--Hb_008948_070 Hb_100395_010 Hb_100395_010 Hb_096974_010--Hb_100395_010 Hb_001971_030 Hb_001971_030 Hb_096974_010--Hb_001971_030 Hb_004544_010--Hb_043522_010 Hb_004785_160 Hb_004785_160 Hb_004544_010--Hb_004785_160 Hb_002973_070 Hb_002973_070 Hb_004544_010--Hb_002973_070 Hb_004544_010--Hb_001971_030 Hb_000110_030 Hb_000110_030 Hb_004544_010--Hb_000110_030 Hb_043522_010--Hb_004785_160 Hb_012404_050 Hb_012404_050 Hb_043522_010--Hb_012404_050 Hb_043522_010--Hb_002973_070 Hb_043522_010--Hb_001971_030 Hb_000635_190 Hb_000635_190 Hb_003050_170--Hb_000635_190 Hb_185830_090 Hb_185830_090 Hb_003050_170--Hb_185830_090 Hb_096878_010 Hb_096878_010 Hb_003050_170--Hb_096878_010 Hb_006721_060 Hb_006721_060 Hb_003050_170--Hb_006721_060 Hb_004297_050--Hb_100395_010 Hb_004297_050--Hb_003968_010 Hb_004297_050--Hb_008948_070 Hb_005599_010 Hb_005599_010 Hb_004297_050--Hb_005599_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.107429 0.130622 0.0908716 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0315686 0

CAGE analysis