Hb_004297_050

Information

Type -
Description -
Location Contig4297: 99814-101358
Sequence    

Annotation

kegg
ID rcu:RCOM_0792010
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_002529058.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9ZUX1
description Cytochrome P450 94C1 OS=Arabidopsis thaliana GN=CYP94C1 PE=2 SV=1
trembl
ID B9SST9
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0792010 PE=3 SV=1
Gene Ontology
ID GO:0043231
description cytochrome p450 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42144: 99422-101445
cDNA
(Sanger)
(ID:Location)		 017_E13.ab1: 100966-101445 , 018_P06.ab1: 100762-101445 , 027_L19.ab1: 100723-101445

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004297_050 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_096974_010 0.0368614837 - - PREDICTED: uncharacterized protein LOC105123384 isoform X1 [Populus euphratica]
3 Hb_008725_030 0.1079417483 - - conserved hypothetical protein [Ricinus communis]
4 Hb_100395_010 0.1167200213 - - ankyrin repeat-containing protein, putative [Ricinus communis]
5 Hb_003968_010 0.1180768313 - - UDP-glucosyltransferase, putative [Ricinus communis]
6 Hb_008948_070 0.1320069281 - - PREDICTED: phospholipase D alpha 1-like isoform X1 [Jatropha curcas]
7 Hb_005599_010 0.1327994339 - - Protein MLO, putative [Ricinus communis]
8 Hb_054165_010 0.1359031925 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
9 Hb_001002_020 0.1367305171 - - ATP binding protein, putative [Ricinus communis]
10 Hb_003847_090 0.1378694553 - - PREDICTED: tyrosine decarboxylase 1-like [Jatropha curcas]
11 Hb_003050_170 0.1396747141 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000277_030 0.139852387 desease resistance Gene Name: NB-ARC hypothetical protein POPTR_0004s20690g [Populus trichocarpa]
13 Hb_002540_100 0.1409525525 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
14 Hb_005928_010 0.1416540917 - - PREDICTED: phospholipase A1-Igamma1, chloroplastic-like [Jatropha curcas]
15 Hb_023386_060 0.1425822338 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
16 Hb_001971_030 0.1456558251 - - PREDICTED: exonuclease 1 [Jatropha curcas]
17 Hb_006083_010 0.1477937081 transcription factor TF Family: B3 DNA binding protein, putative [Ricinus communis]
18 Hb_000365_110 0.1480604201 transcription factor TF Family: GRAS PREDICTED: protein SCARECROW [Jatropha curcas]
19 Hb_064885_010 0.1508498225 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
20 Hb_160653_010 0.1521320301 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]

Gene co-expression network

sample Hb_004297_050 Hb_004297_050 Hb_096974_010 Hb_096974_010 Hb_004297_050--Hb_096974_010 Hb_008725_030 Hb_008725_030 Hb_004297_050--Hb_008725_030 Hb_100395_010 Hb_100395_010 Hb_004297_050--Hb_100395_010 Hb_003968_010 Hb_003968_010 Hb_004297_050--Hb_003968_010 Hb_008948_070 Hb_008948_070 Hb_004297_050--Hb_008948_070 Hb_005599_010 Hb_005599_010 Hb_004297_050--Hb_005599_010 Hb_096974_010--Hb_008725_030 Hb_096974_010--Hb_003968_010 Hb_096974_010--Hb_008948_070 Hb_096974_010--Hb_100395_010 Hb_001971_030 Hb_001971_030 Hb_096974_010--Hb_001971_030 Hb_008725_030--Hb_003968_010 Hb_004544_010 Hb_004544_010 Hb_008725_030--Hb_004544_010 Hb_043522_010 Hb_043522_010 Hb_008725_030--Hb_043522_010 Hb_003050_170 Hb_003050_170 Hb_008725_030--Hb_003050_170 Hb_000192_030 Hb_000192_030 Hb_100395_010--Hb_000192_030 Hb_000953_180 Hb_000953_180 Hb_100395_010--Hb_000953_180 Hb_021142_030 Hb_021142_030 Hb_100395_010--Hb_021142_030 Hb_000365_110 Hb_000365_110 Hb_100395_010--Hb_000365_110 Hb_009385_010 Hb_009385_010 Hb_100395_010--Hb_009385_010 Hb_001410_040 Hb_001410_040 Hb_100395_010--Hb_001410_040 Hb_004096_140 Hb_004096_140 Hb_003968_010--Hb_004096_140 Hb_138705_010 Hb_138705_010 Hb_003968_010--Hb_138705_010 Hb_003968_010--Hb_003050_170 Hb_001019_140 Hb_001019_140 Hb_003968_010--Hb_001019_140 Hb_001846_030 Hb_001846_030 Hb_008948_070--Hb_001846_030 Hb_008948_070--Hb_000953_180 Hb_008948_070--Hb_000192_030 Hb_006478_140 Hb_006478_140 Hb_008948_070--Hb_006478_140 Hb_008948_070--Hb_000365_110 Hb_004154_010 Hb_004154_010 Hb_005599_010--Hb_004154_010 Hb_003226_060 Hb_003226_060 Hb_005599_010--Hb_003226_060 Hb_000397_170 Hb_000397_170 Hb_005599_010--Hb_000397_170 Hb_002540_100 Hb_002540_100 Hb_005599_010--Hb_002540_100 Hb_014549_010 Hb_014549_010 Hb_005599_010--Hb_014549_010 Hb_006197_010 Hb_006197_010 Hb_005599_010--Hb_006197_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 7.23192 11.6053 7.4191 0 0.0264283
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.957058 0

CAGE analysis