Hb_087427_010

Information

Type -
Description -
Location Contig87427: 6046-9986
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa007748mg
description hypothetical protein
nr
ID XP_007201366.1
description hypothetical protein PRUPE_ppa007748mg [Prunus persica]
swissprot
ID Q96520
description Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1
trembl
ID M5W6X8
description Peroxidase OS=Prunus persica GN=PRUPE_ppa007748mg PE=3 SV=1
Gene Ontology
ID GO:0004601
description peroxidase 12-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61222: 6244-9592
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_087427_010 0.0 - - hypothetical protein PRUPE_ppa007748mg [Prunus persica]
2 Hb_000631_100 0.0901586188 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Jatropha curcas]
3 Hb_033053_020 0.0950174309 - - hypothetical protein JCGZ_01204 [Jatropha curcas]
4 Hb_189208_050 0.1019091432 - - PREDICTED: uncharacterized protein LOC105642694 isoform X2 [Jatropha curcas]
5 Hb_008021_040 0.1084005822 - - PREDICTED: AP2-like ethylene-responsive transcription factor ANT [Jatropha curcas]
6 Hb_024868_010 0.1107668229 - - protein kinase, putative [Ricinus communis]
7 Hb_006916_120 0.1141821814 - - PREDICTED: UDP-arabinopyranose mutase 1 [Jatropha curcas]
8 Hb_029142_040 0.1238045155 - - replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis]
9 Hb_002888_100 0.1238974977 - - PREDICTED: uncharacterized protein LOC103699074, partial [Phoenix dactylifera]
10 Hb_002641_140 0.1252248059 - - protein phosphatase 2c, putative [Ricinus communis]
11 Hb_004659_100 0.1256366981 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000411_020 0.1272074176 - - cytochrome P450, putative [Ricinus communis]
13 Hb_009838_120 0.130815738 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA13 isoform X1 [Jatropha curcas]
14 Hb_004631_100 0.1332666054 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH96 [Jatropha curcas]
15 Hb_009627_020 0.1346194142 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
16 Hb_000975_090 0.1386893449 - - Zeamatin precursor, putative [Ricinus communis]
17 Hb_000329_720 0.1386960205 transcription factor TF Family: ERF hypothetical protein POPTR_0014s05500g [Populus trichocarpa]
18 Hb_003216_140 0.1426523391 - - F-box protein SNE, putative [Ricinus communis]
19 Hb_006351_030 0.1433572068 - - PREDICTED: E3 ubiquitin-protein ligase MARCH8-like [Jatropha curcas]
20 Hb_001562_030 0.1453151789 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_087427_010 Hb_087427_010 Hb_000631_100 Hb_000631_100 Hb_087427_010--Hb_000631_100 Hb_033053_020 Hb_033053_020 Hb_087427_010--Hb_033053_020 Hb_189208_050 Hb_189208_050 Hb_087427_010--Hb_189208_050 Hb_008021_040 Hb_008021_040 Hb_087427_010--Hb_008021_040 Hb_024868_010 Hb_024868_010 Hb_087427_010--Hb_024868_010 Hb_006916_120 Hb_006916_120 Hb_087427_010--Hb_006916_120 Hb_000411_020 Hb_000411_020 Hb_000631_100--Hb_000411_020 Hb_000631_100--Hb_189208_050 Hb_000631_100--Hb_024868_010 Hb_002641_140 Hb_002641_140 Hb_000631_100--Hb_002641_140 Hb_000631_100--Hb_008021_040 Hb_004659_100 Hb_004659_100 Hb_033053_020--Hb_004659_100 Hb_004631_100 Hb_004631_100 Hb_033053_020--Hb_004631_100 Hb_033053_020--Hb_000631_100 Hb_038718_010 Hb_038718_010 Hb_033053_020--Hb_038718_010 Hb_033053_020--Hb_008021_040 Hb_003216_140 Hb_003216_140 Hb_189208_050--Hb_003216_140 Hb_189208_050--Hb_000411_020 Hb_189208_050--Hb_002641_140 Hb_001247_090 Hb_001247_090 Hb_189208_050--Hb_001247_090 Hb_189208_050--Hb_024868_010 Hb_008021_040--Hb_002641_140 Hb_139461_010 Hb_139461_010 Hb_008021_040--Hb_139461_010 Hb_008021_040--Hb_189208_050 Hb_008021_040--Hb_024868_010 Hb_001048_070 Hb_001048_070 Hb_008021_040--Hb_001048_070 Hb_029142_040 Hb_029142_040 Hb_008021_040--Hb_029142_040 Hb_009838_120 Hb_009838_120 Hb_024868_010--Hb_009838_120 Hb_001645_030 Hb_001645_030 Hb_024868_010--Hb_001645_030 Hb_009627_020 Hb_009627_020 Hb_024868_010--Hb_009627_020 Hb_024868_010--Hb_003216_140 Hb_133508_020 Hb_133508_020 Hb_006916_120--Hb_133508_020 Hb_000975_090 Hb_000975_090 Hb_006916_120--Hb_000975_090 Hb_000152_590 Hb_000152_590 Hb_006916_120--Hb_000152_590 Hb_006916_120--Hb_000631_100 Hb_006351_030 Hb_006351_030 Hb_006916_120--Hb_006351_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.161818 1.10689 1.83676 3.15377 0.0433094 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.11585 0.411059

CAGE analysis