Hb_133508_020

Information

Type -
Description -
Location Contig133508: 21570-34657
Sequence    

Annotation

kegg
ID rcu:RCOM_0602360
description multicopper oxidase, putative (EC:1.10.3.3)
nr
ID XP_012079166.1
description PREDICTED: L-ascorbate oxidase homolog [Jatropha curcas]
swissprot
ID P29162
description L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1
trembl
ID A0A067K6L0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12337 PE=4 SV=1
Gene Ontology
ID GO:0009505
description l-ascorbate oxidase homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09491: 30458-34508
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_133508_020 0.0 - - PREDICTED: L-ascorbate oxidase homolog [Jatropha curcas]
2 Hb_006916_120 0.0676470228 - - PREDICTED: UDP-arabinopyranose mutase 1 [Jatropha curcas]
3 Hb_000152_590 0.0930751064 - - PREDICTED: 21 kDa protein [Jatropha curcas]
4 Hb_000975_090 0.1025381495 - - Zeamatin precursor, putative [Ricinus communis]
5 Hb_185830_090 0.1074523667 - - conserved hypothetical protein [Ricinus communis]
6 Hb_010672_010 0.1090030017 - - hypothetical protein JCGZ_00895 [Jatropha curcas]
7 Hb_096878_010 0.1127457983 - - hypothetical protein POPTR_0112s002001g, partial [Populus trichocarpa]
8 Hb_015934_100 0.1159481879 - - phospholipid/glycerol acyltransferase family protein [Populus trichocarpa]
9 Hb_008725_100 0.1221654277 - - PREDICTED: histone H1-like [Jatropha curcas]
10 Hb_146901_020 0.1242361294 - - -
11 Hb_000111_120 0.1254113355 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
12 Hb_006351_030 0.126471678 - - PREDICTED: E3 ubiquitin-protein ligase MARCH8-like [Jatropha curcas]
13 Hb_001989_040 0.1269954898 - - PREDICTED: neurofilament heavy polypeptide [Jatropha curcas]
14 Hb_000098_270 0.1309456556 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
15 Hb_000635_190 0.1324245065 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103322127 [Prunus mume]
16 Hb_000509_090 0.1342749981 - - Reticuline oxidase precursor, putative [Ricinus communis]
17 Hb_000631_100 0.1343089161 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Jatropha curcas]
18 Hb_003875_040 0.1408535688 - - PREDICTED: endoglucanase 11-like [Jatropha curcas]
19 Hb_013358_030 0.1424188569 - - PREDICTED: U-box domain-containing protein 12-like [Jatropha curcas]
20 Hb_003712_010 0.14487122 - - protein binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_133508_020 Hb_133508_020 Hb_006916_120 Hb_006916_120 Hb_133508_020--Hb_006916_120 Hb_000152_590 Hb_000152_590 Hb_133508_020--Hb_000152_590 Hb_000975_090 Hb_000975_090 Hb_133508_020--Hb_000975_090 Hb_185830_090 Hb_185830_090 Hb_133508_020--Hb_185830_090 Hb_010672_010 Hb_010672_010 Hb_133508_020--Hb_010672_010 Hb_096878_010 Hb_096878_010 Hb_133508_020--Hb_096878_010 Hb_006916_120--Hb_000975_090 Hb_006916_120--Hb_000152_590 Hb_000631_100 Hb_000631_100 Hb_006916_120--Hb_000631_100 Hb_006351_030 Hb_006351_030 Hb_006916_120--Hb_006351_030 Hb_087427_010 Hb_087427_010 Hb_006916_120--Hb_087427_010 Hb_000152_590--Hb_010672_010 Hb_001782_100 Hb_001782_100 Hb_000152_590--Hb_001782_100 Hb_000152_590--Hb_006351_030 Hb_146901_020 Hb_146901_020 Hb_000152_590--Hb_146901_020 Hb_170632_010 Hb_170632_010 Hb_000975_090--Hb_170632_010 Hb_000060_080 Hb_000060_080 Hb_000975_090--Hb_000060_080 Hb_000975_090--Hb_000631_100 Hb_001562_030 Hb_001562_030 Hb_000975_090--Hb_001562_030 Hb_185830_090--Hb_096878_010 Hb_003050_170 Hb_003050_170 Hb_185830_090--Hb_003050_170 Hb_000635_190 Hb_000635_190 Hb_185830_090--Hb_000635_190 Hb_004154_010 Hb_004154_010 Hb_185830_090--Hb_004154_010 Hb_006721_060 Hb_006721_060 Hb_185830_090--Hb_006721_060 Hb_010672_010--Hb_146901_020 Hb_000592_100 Hb_000592_100 Hb_010672_010--Hb_000592_100 Hb_000098_270 Hb_000098_270 Hb_010672_010--Hb_000098_270 Hb_010672_010--Hb_001782_100 Hb_020025_030 Hb_020025_030 Hb_010672_010--Hb_020025_030 Hb_096878_010--Hb_000635_190 Hb_096878_010--Hb_006721_060 Hb_000172_310 Hb_000172_310 Hb_096878_010--Hb_000172_310 Hb_096878_010--Hb_003050_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0635267 2.28736 6.95604 8.99083 0.0196412 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.04225 0.248965

CAGE analysis