Hb_010672_010

Information

Type -
Description -
Location Contig10672: 5956-6333
Sequence    

Annotation

kegg
ID rcu:RCOM_0082540
description hypothetical protein
nr
ID KDP39138.1
description hypothetical protein JCGZ_00895 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KVY0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00895 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010672_010 0.0 - - hypothetical protein JCGZ_00895 [Jatropha curcas]
2 Hb_000152_590 0.0482900438 - - PREDICTED: 21 kDa protein [Jatropha curcas]
3 Hb_146901_020 0.1019630299 - - -
4 Hb_000592_100 0.1027794853 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
5 Hb_000098_270 0.1057647067 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
6 Hb_001782_100 0.1076650076 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
7 Hb_020025_030 0.1088325185 transcription factor TF Family: PHD PREDICTED: protein Jade-1 [Populus euphratica]
8 Hb_133508_020 0.1090030017 - - PREDICTED: L-ascorbate oxidase homolog [Jatropha curcas]
9 Hb_007126_010 0.1141334558 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
10 Hb_006351_030 0.1161192695 - - PREDICTED: E3 ubiquitin-protein ligase MARCH8-like [Jatropha curcas]
11 Hb_008725_100 0.1163516437 - - PREDICTED: histone H1-like [Jatropha curcas]
12 Hb_001247_090 0.1175296747 - - PREDICTED: uncharacterized protein LOC105647395 [Jatropha curcas]
13 Hb_027556_060 0.1186536378 - - hypothetical protein POPTR_0001s03520g [Populus trichocarpa]
14 Hb_006916_120 0.1214057124 - - PREDICTED: UDP-arabinopyranose mutase 1 [Jatropha curcas]
15 Hb_004531_060 0.1218630328 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 3 [Jatropha curcas]
16 Hb_000339_050 0.1227620582 - - PREDICTED: nucleobase-ascorbate transporter 2 [Jatropha curcas]
17 Hb_001263_030 0.1286323554 - - PREDICTED: uncharacterized protein At3g28850-like [Jatropha curcas]
18 Hb_000805_270 0.1288754175 - - PREDICTED: expansin-A4 [Gossypium raimondii]
19 Hb_000094_230 0.1301546107 - - hypothetical protein JCGZ_04416 [Jatropha curcas]
20 Hb_159809_040 0.1359613142 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_010672_010 Hb_010672_010 Hb_000152_590 Hb_000152_590 Hb_010672_010--Hb_000152_590 Hb_146901_020 Hb_146901_020 Hb_010672_010--Hb_146901_020 Hb_000592_100 Hb_000592_100 Hb_010672_010--Hb_000592_100 Hb_000098_270 Hb_000098_270 Hb_010672_010--Hb_000098_270 Hb_001782_100 Hb_001782_100 Hb_010672_010--Hb_001782_100 Hb_020025_030 Hb_020025_030 Hb_010672_010--Hb_020025_030 Hb_000152_590--Hb_001782_100 Hb_133508_020 Hb_133508_020 Hb_000152_590--Hb_133508_020 Hb_006351_030 Hb_006351_030 Hb_000152_590--Hb_006351_030 Hb_006916_120 Hb_006916_120 Hb_000152_590--Hb_006916_120 Hb_000152_590--Hb_146901_020 Hb_027556_060 Hb_027556_060 Hb_146901_020--Hb_027556_060 Hb_013358_030 Hb_013358_030 Hb_146901_020--Hb_013358_030 Hb_003875_040 Hb_003875_040 Hb_146901_020--Hb_003875_040 Hb_003216_140 Hb_003216_140 Hb_146901_020--Hb_003216_140 Hb_000024_150 Hb_000024_150 Hb_000592_100--Hb_000024_150 Hb_008725_100 Hb_008725_100 Hb_000592_100--Hb_008725_100 Hb_000862_050 Hb_000862_050 Hb_000592_100--Hb_000862_050 Hb_024682_030 Hb_024682_030 Hb_000592_100--Hb_024682_030 Hb_000010_440 Hb_000010_440 Hb_000592_100--Hb_000010_440 Hb_000098_270--Hb_006351_030 Hb_000289_020 Hb_000289_020 Hb_000098_270--Hb_000289_020 Hb_000098_270--Hb_008725_100 Hb_006810_040 Hb_006810_040 Hb_000098_270--Hb_006810_040 Hb_043552_010 Hb_043552_010 Hb_000098_270--Hb_043552_010 Hb_001782_100--Hb_006351_030 Hb_007590_110 Hb_007590_110 Hb_001782_100--Hb_007590_110 Hb_001782_100--Hb_024682_030 Hb_000535_040 Hb_000535_040 Hb_001782_100--Hb_000535_040 Hb_000140_200 Hb_000140_200 Hb_020025_030--Hb_000140_200 Hb_001263_030 Hb_001263_030 Hb_020025_030--Hb_001263_030 Hb_000094_230 Hb_000094_230 Hb_020025_030--Hb_000094_230 Hb_004531_060 Hb_004531_060 Hb_020025_030--Hb_004531_060 Hb_003656_080 Hb_003656_080 Hb_020025_030--Hb_003656_080 Hb_000977_190 Hb_000977_190 Hb_020025_030--Hb_000977_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.514962 3.25882 3.97333 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.36609 0.30134

CAGE analysis