Hb_000024_150

Information

Type -
Description -
Location Contig24: 200812-210929
Sequence    

Annotation

kegg
ID pop:POPTR_0018s14020g
description POPTRDRAFT_826057; hypothetical protein
nr
ID XP_012084543.1
description PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
swissprot
ID O64481
description Subtilisin-like protease SBT2.5 OS=Arabidopsis thaliana GN=SBT2.5 PE=2 SV=1
trembl
ID A0A067JU07
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19817 PE=3 SV=1
Gene Ontology
ID GO:0005618
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25128: 200905-210904
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000024_150 0.0 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
2 Hb_000592_100 0.0635818301 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
3 Hb_000010_440 0.0832912788 - - PREDICTED: peroxisome biogenesis factor 10-like [Jatropha curcas]
4 Hb_024682_030 0.0999719437 - - PREDICTED: DNA replication licensing factor MCM2 [Jatropha curcas]
5 Hb_000941_010 0.1055263307 - - hypothetical protein RCOM_0504460 [Ricinus communis]
6 Hb_000365_430 0.1102146244 - - PREDICTED: BTB/POZ domain-containing protein At3g08570-like [Jatropha curcas]
7 Hb_002817_030 0.1115643508 - - hypothetical protein POPTR_0001s39195g [Populus trichocarpa]
8 Hb_008725_100 0.1173850222 - - PREDICTED: histone H1-like [Jatropha curcas]
9 Hb_000731_280 0.1200042543 - - PREDICTED: uncharacterized protein LOC105649351 isoform X1 [Jatropha curcas]
10 Hb_000862_050 0.1230289123 transcription factor TF Family: GRAS DELLA protein RGL1, putative [Ricinus communis]
11 Hb_001638_150 0.1251389808 - - acyltransferase, putative [Ricinus communis]
12 Hb_000359_180 0.1280083664 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000431_100 0.1285716293 - - ribonucleoside-diphosphate reductase small chain, putative [Ricinus communis]
14 Hb_003573_050 0.128772012 - - ARF GTPase activator, putative [Ricinus communis]
15 Hb_000417_140 0.1288469133 - - PREDICTED: nucleobase-ascorbate transporter 2 [Jatropha curcas]
16 Hb_001437_260 0.1311737869 - - PREDICTED: protein FAM98B-like [Jatropha curcas]
17 Hb_000152_590 0.1332512148 - - PREDICTED: 21 kDa protein [Jatropha curcas]
18 Hb_004117_280 0.1340257034 - - hypothetical protein JCGZ_00361 [Jatropha curcas]
19 Hb_080147_070 0.1342804138 - - Rop5 [Hevea brasiliensis]
20 Hb_003360_010 0.1366952239 - - Bipolar kinesin KRP-130, putative [Ricinus communis]

Gene co-expression network

sample Hb_000024_150 Hb_000024_150 Hb_000592_100 Hb_000592_100 Hb_000024_150--Hb_000592_100 Hb_000010_440 Hb_000010_440 Hb_000024_150--Hb_000010_440 Hb_024682_030 Hb_024682_030 Hb_000024_150--Hb_024682_030 Hb_000941_010 Hb_000941_010 Hb_000024_150--Hb_000941_010 Hb_000365_430 Hb_000365_430 Hb_000024_150--Hb_000365_430 Hb_002817_030 Hb_002817_030 Hb_000024_150--Hb_002817_030 Hb_008725_100 Hb_008725_100 Hb_000592_100--Hb_008725_100 Hb_000862_050 Hb_000862_050 Hb_000592_100--Hb_000862_050 Hb_000592_100--Hb_024682_030 Hb_000592_100--Hb_000010_440 Hb_010672_010 Hb_010672_010 Hb_000592_100--Hb_010672_010 Hb_000010_440--Hb_000365_430 Hb_001638_150 Hb_001638_150 Hb_000010_440--Hb_001638_150 Hb_000010_440--Hb_008725_100 Hb_000411_020 Hb_000411_020 Hb_000010_440--Hb_000411_020 Hb_003360_010 Hb_003360_010 Hb_024682_030--Hb_003360_010 Hb_000431_100 Hb_000431_100 Hb_024682_030--Hb_000431_100 Hb_001524_120 Hb_001524_120 Hb_024682_030--Hb_001524_120 Hb_001782_100 Hb_001782_100 Hb_024682_030--Hb_001782_100 Hb_001437_260 Hb_001437_260 Hb_000941_010--Hb_001437_260 Hb_001104_020 Hb_001104_020 Hb_000941_010--Hb_001104_020 Hb_002918_120 Hb_002918_120 Hb_000941_010--Hb_002918_120 Hb_000732_220 Hb_000732_220 Hb_000941_010--Hb_000732_220 Hb_000731_280 Hb_000731_280 Hb_000941_010--Hb_000731_280 Hb_003092_020 Hb_003092_020 Hb_000365_430--Hb_003092_020 Hb_009189_100 Hb_009189_100 Hb_000365_430--Hb_009189_100 Hb_001936_180 Hb_001936_180 Hb_000365_430--Hb_001936_180 Hb_007290_050 Hb_007290_050 Hb_000365_430--Hb_007290_050 Hb_000098_260 Hb_000098_260 Hb_000365_430--Hb_000098_260 Hb_000329_720 Hb_000329_720 Hb_000365_430--Hb_000329_720 Hb_007237_020 Hb_007237_020 Hb_002817_030--Hb_007237_020 Hb_027337_010 Hb_027337_010 Hb_002817_030--Hb_027337_010 Hb_004117_280 Hb_004117_280 Hb_002817_030--Hb_004117_280 Hb_000914_140 Hb_000914_140 Hb_002817_030--Hb_000914_140 Hb_002311_500 Hb_002311_500 Hb_002817_030--Hb_002311_500 Hb_003573_050 Hb_003573_050 Hb_002817_030--Hb_003573_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0921447 6.92153 36.1938 28.397 0.115582 0.023362
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 13.3962 7.94052

CAGE analysis