Hb_000731_280

Information

Type -
Description -
Location Contig731: 234400-235866
Sequence    

Annotation

kegg
ID rcu:RCOM_0905070
description hypothetical protein
nr
ID XP_012091364.1
description PREDICTED: uncharacterized protein LOC105649351 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JAE4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21232 PE=4 SV=1
Gene Ontology
ID GO:0003677
description at hook motif-containing isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000731_280 0.0 - - PREDICTED: uncharacterized protein LOC105649351 isoform X1 [Jatropha curcas]
2 Hb_005993_030 0.0917125486 - - putative senescence-associated protein SAG102 [Populus trichocarpa]
3 Hb_000941_010 0.108077797 - - hypothetical protein RCOM_0504460 [Ricinus communis]
4 Hb_002918_120 0.1109051769 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_004117_280 0.1196681455 - - hypothetical protein JCGZ_00361 [Jatropha curcas]
6 Hb_000024_150 0.1200042543 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
7 Hb_001437_260 0.122726552 - - PREDICTED: protein FAM98B-like [Jatropha curcas]
8 Hb_003687_040 0.1232983734 - - PREDICTED: uncharacterized protein LOC105632153 [Jatropha curcas]
9 Hb_001135_010 0.1238112 - - hypothetical protein CICLE_v10024612mg [Citrus clementina]
10 Hb_001040_080 0.1264116098 - - sphingolipid delta 4 desaturase/C-4 hydroxylase protein des2, putative [Ricinus communis]
11 Hb_000834_220 0.1264245696 - - PREDICTED: uncharacterized protein LOC105637705 [Jatropha curcas]
12 Hb_002817_030 0.1280295002 - - hypothetical protein POPTR_0001s39195g [Populus trichocarpa]
13 Hb_001776_130 0.1280920956 - - metallothionein [Hevea brasiliensis]
14 Hb_004832_010 0.1281545482 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004592_010 0.1285657247 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2b-like [Jatropha curcas]
16 Hb_137272_010 0.1313241204 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
17 Hb_005730_110 0.1316760842 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
18 Hb_000316_060 0.1320414262 - - hypothetical protein CISIN_1g017081mg [Citrus sinensis]
19 Hb_005144_060 0.1330818819 - - Disease resistance family protein / LRR family protein, putative [Theobroma cacao]
20 Hb_003573_050 0.1392376971 - - ARF GTPase activator, putative [Ricinus communis]

Gene co-expression network

sample Hb_000731_280 Hb_000731_280 Hb_005993_030 Hb_005993_030 Hb_000731_280--Hb_005993_030 Hb_000941_010 Hb_000941_010 Hb_000731_280--Hb_000941_010 Hb_002918_120 Hb_002918_120 Hb_000731_280--Hb_002918_120 Hb_004117_280 Hb_004117_280 Hb_000731_280--Hb_004117_280 Hb_000024_150 Hb_000024_150 Hb_000731_280--Hb_000024_150 Hb_001437_260 Hb_001437_260 Hb_000731_280--Hb_001437_260 Hb_000866_040 Hb_000866_040 Hb_005993_030--Hb_000866_040 Hb_005993_030--Hb_002918_120 Hb_003687_040 Hb_003687_040 Hb_005993_030--Hb_003687_040 Hb_005993_030--Hb_000941_010 Hb_001195_740 Hb_001195_740 Hb_005993_030--Hb_001195_740 Hb_000941_010--Hb_001437_260 Hb_001104_020 Hb_001104_020 Hb_000941_010--Hb_001104_020 Hb_000941_010--Hb_002918_120 Hb_000732_220 Hb_000732_220 Hb_000941_010--Hb_000732_220 Hb_000941_010--Hb_000024_150 Hb_004446_060 Hb_004446_060 Hb_002918_120--Hb_004446_060 Hb_002918_120--Hb_001195_740 Hb_000834_220 Hb_000834_220 Hb_002918_120--Hb_000834_220 Hb_005144_060 Hb_005144_060 Hb_002918_120--Hb_005144_060 Hb_002918_120--Hb_001437_260 Hb_021346_020 Hb_021346_020 Hb_002918_120--Hb_021346_020 Hb_004611_050 Hb_004611_050 Hb_004117_280--Hb_004611_050 Hb_003092_020 Hb_003092_020 Hb_004117_280--Hb_003092_020 Hb_002817_030 Hb_002817_030 Hb_004117_280--Hb_002817_030 Hb_002490_060 Hb_002490_060 Hb_004117_280--Hb_002490_060 Hb_000627_040 Hb_000627_040 Hb_004117_280--Hb_000627_040 Hb_000163_180 Hb_000163_180 Hb_004117_280--Hb_000163_180 Hb_000592_100 Hb_000592_100 Hb_000024_150--Hb_000592_100 Hb_000010_440 Hb_000010_440 Hb_000024_150--Hb_000010_440 Hb_024682_030 Hb_024682_030 Hb_000024_150--Hb_024682_030 Hb_000365_430 Hb_000365_430 Hb_000024_150--Hb_000365_430 Hb_000024_150--Hb_002817_030 Hb_001437_260--Hb_004446_060 Hb_002805_180 Hb_002805_180 Hb_001437_260--Hb_002805_180 Hb_004832_010 Hb_004832_010 Hb_001437_260--Hb_004832_010 Hb_001437_260--Hb_001104_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.175586 1.81151 7.73909 4.28917 0.0263383 0.0812422
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0320405 0 0.0473176 2.67721 2.37079

CAGE analysis