Hb_001524_120

Information

Type -
Description -
Location Contig1524: 226324-229553
Sequence    

Annotation

kegg
ID rcu:RCOM_0197350
description myo-inositol-1 phosphate synthase, putative (EC:5.5.1.4)
nr
ID AFD61599.1
description myo-inositol-1 phosphate synthase [Hevea brasiliensis]
swissprot
ID Q9FYV1
description Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1
trembl
ID H9BMN3
description Myo-inositol-1 phosphate synthase OS=Hevea brasiliensis GN=MIPS PE=2 SV=1
Gene Ontology
ID GO:0005737
description inositol-3-phosphate synthase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13102: 226311-229512 , PASA_asmbl_13103: 226416-229157
cDNA
(Sanger)
(ID:Location)		 038_J14.ab1: 228186-229501

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001524_120 0.0 - - myo-inositol-1 phosphate synthase [Hevea brasiliensis]
2 Hb_000431_100 0.0801752335 - - ribonucleoside-diphosphate reductase small chain, putative [Ricinus communis]
3 Hb_003360_010 0.0922391803 - - Bipolar kinesin KRP-130, putative [Ricinus communis]
4 Hb_003813_090 0.0923040002 - - PREDICTED: uncharacterized protein LOC105638743 [Jatropha curcas]
5 Hb_005183_150 0.0976174121 - - PREDICTED: protein CYPRO4 [Jatropha curcas]
6 Hb_024682_030 0.0988329655 - - PREDICTED: DNA replication licensing factor MCM2 [Jatropha curcas]
7 Hb_003228_050 0.105075601 - - chromomethylase [Hevea brasiliensis]
8 Hb_002805_180 0.1073286654 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000739_170 0.1082460715 - - PREDICTED: 65-kDa microtubule-associated protein 4 [Jatropha curcas]
10 Hb_001348_100 0.1097950643 - - PREDICTED: uncharacterized protein LOC105638934 [Jatropha curcas]
11 Hb_002030_130 0.1100861545 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]
12 Hb_000522_160 0.1164007601 - - PREDICTED: probable serine/threonine-protein kinase At5g41260 [Jatropha curcas]
13 Hb_000359_180 0.1165234823 - - conserved hypothetical protein [Ricinus communis]
14 Hb_007632_210 0.1180320372 - - PREDICTED: sodium/potassium/calcium exchanger 1 [Populus euphratica]
15 Hb_005675_050 0.1207621253 - - alpha-glucosidase, putative [Ricinus communis]
16 Hb_006693_010 0.1247404321 - - PREDICTED: uncharacterized protein LOC105628875 [Jatropha curcas]
17 Hb_001999_160 0.124805856 - - hypothetical protein JCGZ_08488 [Jatropha curcas]
18 Hb_002045_010 0.1260480052 - - PREDICTED: F-box/LRR-repeat protein 17 [Jatropha curcas]
19 Hb_005542_150 0.1270535885 - - PREDICTED: uncharacterized protein LOC105649178 [Jatropha curcas]
20 Hb_124677_050 0.1286394027 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001524_120 Hb_001524_120 Hb_000431_100 Hb_000431_100 Hb_001524_120--Hb_000431_100 Hb_003360_010 Hb_003360_010 Hb_001524_120--Hb_003360_010 Hb_003813_090 Hb_003813_090 Hb_001524_120--Hb_003813_090 Hb_005183_150 Hb_005183_150 Hb_001524_120--Hb_005183_150 Hb_024682_030 Hb_024682_030 Hb_001524_120--Hb_024682_030 Hb_003228_050 Hb_003228_050 Hb_001524_120--Hb_003228_050 Hb_000431_100--Hb_003360_010 Hb_000431_100--Hb_024682_030 Hb_002276_250 Hb_002276_250 Hb_000431_100--Hb_002276_250 Hb_001348_100 Hb_001348_100 Hb_000431_100--Hb_001348_100 Hb_000046_240 Hb_000046_240 Hb_000431_100--Hb_000046_240 Hb_003360_010--Hb_024682_030 Hb_000260_670 Hb_000260_670 Hb_003360_010--Hb_000260_670 Hb_124677_050 Hb_124677_050 Hb_003360_010--Hb_124677_050 Hb_003360_010--Hb_005183_150 Hb_000576_140 Hb_000576_140 Hb_003813_090--Hb_000576_140 Hb_006693_010 Hb_006693_010 Hb_003813_090--Hb_006693_010 Hb_000956_050 Hb_000956_050 Hb_003813_090--Hb_000956_050 Hb_003813_090--Hb_003228_050 Hb_005675_050 Hb_005675_050 Hb_003813_090--Hb_005675_050 Hb_007632_210 Hb_007632_210 Hb_005183_150--Hb_007632_210 Hb_033041_010 Hb_033041_010 Hb_005183_150--Hb_033041_010 Hb_007632_080 Hb_007632_080 Hb_005183_150--Hb_007632_080 Hb_005183_150--Hb_124677_050 Hb_000592_100 Hb_000592_100 Hb_024682_030--Hb_000592_100 Hb_000024_150 Hb_000024_150 Hb_024682_030--Hb_000024_150 Hb_001782_100 Hb_001782_100 Hb_024682_030--Hb_001782_100 Hb_002030_130 Hb_002030_130 Hb_003228_050--Hb_002030_130 Hb_003228_050--Hb_007632_210 Hb_003228_050--Hb_124677_050 Hb_101133_050 Hb_101133_050 Hb_003228_050--Hb_101133_050 Hb_003228_050--Hb_000956_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.86993 69.3907 1102.38 875.324 3.48559 4.89548
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.0525 20.4276 25.9099 292.793 250.042

CAGE analysis