Hb_033041_010

Information

Type -
Description -
Location Contig33041: 7790-17459
Sequence    

Annotation

kegg
ID cic:CICLE_v10027695mg
description hypothetical protein
nr
ID XP_011006148.1
description PREDICTED: phragmoplast orienting kinesin 2-like [Populus euphratica]
swissprot
ID Q27IK6
description Phragmoplast orienting kinesin 2 OS=Arabidopsis thaliana GN=POK2 PE=2 SV=1
trembl
ID A0A0A0LSX9
description Kinesin-like protein OS=Cucumis sativus GN=Csa_1G025250 PE=3 SV=1
Gene Ontology
ID GO:0015630
description phragmoplast orienting kinesin 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34729: 7623-9591 , PASA_asmbl_34730: 11578-15830 , PASA_asmbl_34731: 16128-16798 , PASA_asmbl_34732: 17256-17593
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033041_010 0.0 - - PREDICTED: phragmoplast orienting kinesin 2-like [Populus euphratica]
2 Hb_007632_080 0.0558020433 - - PREDICTED: intracellular protein transport protein USO1 [Jatropha curcas]
3 Hb_000334_120 0.0718949806 - - PREDICTED: DNA topoisomerase 2 [Jatropha curcas]
4 Hb_005183_150 0.0822871773 - - PREDICTED: protein CYPRO4 [Jatropha curcas]
5 Hb_101133_050 0.0931608734 - - PREDICTED: condensin complex subunit 3 [Jatropha curcas]
6 Hb_000028_530 0.0934587421 - - Protein regulator of cytokinesis, putative [Ricinus communis]
7 Hb_005276_090 0.0990403343 - - PREDICTED: uncharacterized protein LOC105649997 isoform X2 [Jatropha curcas]
8 Hb_003109_010 0.0993120172 - - PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
9 Hb_002374_090 0.1012347474 - - PREDICTED: cyclin-A1-1 [Jatropha curcas]
10 Hb_005542_150 0.1016329639 - - PREDICTED: uncharacterized protein LOC105649178 [Jatropha curcas]
11 Hb_001454_270 0.1040477573 - - PREDICTED: condensin-2 complex subunit D3 isoform X2 [Jatropha curcas]
12 Hb_001688_100 0.1047742779 - - PREDICTED: kinesin-like protein NACK1 [Jatropha curcas]
13 Hb_001584_360 0.1051374043 - - PREDICTED: serine/threonine-protein kinase haspin homolog hrk1 [Jatropha curcas]
14 Hb_000085_360 0.1060654073 - - PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
15 Hb_003106_090 0.1074310551 transcription factor TF Family: E2F-DP E2F, putative [Ricinus communis]
16 Hb_000954_040 0.1128668981 - - PREDICTED: metal tolerance protein 4 [Jatropha curcas]
17 Hb_003777_260 0.1156512157 - - PREDICTED: uncharacterized protein LOC105640927 isoform X4 [Jatropha curcas]
18 Hb_000265_100 0.1166251689 - - PREDICTED: uncharacterized protein LOC105643473 [Jatropha curcas]
19 Hb_000742_180 0.117570539 - - hypothetical protein POPTR_0011s16640g [Populus trichocarpa]
20 Hb_004635_020 0.1177420385 - - PREDICTED: uncharacterized protein At3g28850-like [Jatropha curcas]

Gene co-expression network

sample Hb_033041_010 Hb_033041_010 Hb_007632_080 Hb_007632_080 Hb_033041_010--Hb_007632_080 Hb_000334_120 Hb_000334_120 Hb_033041_010--Hb_000334_120 Hb_005183_150 Hb_005183_150 Hb_033041_010--Hb_005183_150 Hb_101133_050 Hb_101133_050 Hb_033041_010--Hb_101133_050 Hb_000028_530 Hb_000028_530 Hb_033041_010--Hb_000028_530 Hb_005276_090 Hb_005276_090 Hb_033041_010--Hb_005276_090 Hb_007632_080--Hb_005183_150 Hb_003109_010 Hb_003109_010 Hb_007632_080--Hb_003109_010 Hb_007632_080--Hb_000028_530 Hb_007632_080--Hb_101133_050 Hb_007632_080--Hb_000334_120 Hb_000334_120--Hb_000028_530 Hb_001584_360 Hb_001584_360 Hb_000334_120--Hb_001584_360 Hb_000189_350 Hb_000189_350 Hb_000334_120--Hb_000189_350 Hb_000265_100 Hb_000265_100 Hb_000334_120--Hb_000265_100 Hb_000334_120--Hb_005276_090 Hb_007632_210 Hb_007632_210 Hb_005183_150--Hb_007632_210 Hb_003360_010 Hb_003360_010 Hb_005183_150--Hb_003360_010 Hb_001524_120 Hb_001524_120 Hb_005183_150--Hb_001524_120 Hb_124677_050 Hb_124677_050 Hb_005183_150--Hb_124677_050 Hb_002311_090 Hb_002311_090 Hb_101133_050--Hb_002311_090 Hb_001307_150 Hb_001307_150 Hb_101133_050--Hb_001307_150 Hb_007474_020 Hb_007474_020 Hb_101133_050--Hb_007474_020 Hb_016898_020 Hb_016898_020 Hb_101133_050--Hb_016898_020 Hb_000317_120 Hb_000317_120 Hb_101133_050--Hb_000317_120 Hb_101133_050--Hb_005276_090 Hb_000028_530--Hb_000265_100 Hb_002374_090 Hb_002374_090 Hb_000028_530--Hb_002374_090 Hb_000028_530--Hb_000189_350 Hb_004963_020 Hb_004963_020 Hb_000028_530--Hb_004963_020 Hb_000085_360 Hb_000085_360 Hb_005276_090--Hb_000085_360 Hb_000480_060 Hb_000480_060 Hb_005276_090--Hb_000480_060 Hb_003106_090 Hb_003106_090 Hb_005276_090--Hb_003106_090 Hb_119044_040 Hb_119044_040 Hb_005276_090--Hb_119044_040 Hb_005276_090--Hb_002374_090 Hb_003776_050 Hb_003776_050 Hb_005276_090--Hb_003776_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0922833 0.282522 8.23504 3.61098 0.0549634 0.0171772
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0436001 0.0343119 0.148262 1.29109 0.80875

CAGE analysis