Hb_000028_530

Information

Type -
Description -
Location Contig28: 562506-567239
Sequence    

Annotation

kegg
ID rcu:RCOM_1767510
description Protein regulator of cytokinesis, putative
nr
ID XP_002513279.1
description Protein regulator of cytokinesis, putative [Ricinus communis]
swissprot
ID Q9FHM4
description 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1
trembl
ID B9RHR0
description Protein regulator of cytokinesis, putative OS=Ricinus communis GN=RCOM_1767510 PE=4 SV=1
Gene Ontology
ID GO:0008017
description 65-kda microtubule-associated protein 3-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29239: 565975-566982
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000028_530 0.0 - - Protein regulator of cytokinesis, putative [Ricinus communis]
2 Hb_000334_120 0.0685229943 - - PREDICTED: DNA topoisomerase 2 [Jatropha curcas]
3 Hb_000265_100 0.0800848998 - - PREDICTED: uncharacterized protein LOC105643473 [Jatropha curcas]
4 Hb_002374_090 0.0863404292 - - PREDICTED: cyclin-A1-1 [Jatropha curcas]
5 Hb_000189_350 0.0903729919 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 3 [Jatropha curcas]
6 Hb_033041_010 0.0934587421 - - PREDICTED: phragmoplast orienting kinesin 2-like [Populus euphratica]
7 Hb_004963_020 0.0949144745 - - PREDICTED: patellin-4 [Populus euphratica]
8 Hb_004102_090 0.0986703527 transcription factor TF Family: CPP hypothetical protein JCGZ_06186 [Jatropha curcas]
9 Hb_001864_040 0.0986888864 - - PREDICTED: kinesin-1 [Jatropha curcas]
10 Hb_001454_180 0.1011258258 - - PREDICTED: uncharacterized protein LOC105643432 [Jatropha curcas]
11 Hb_005276_090 0.1027949094 - - PREDICTED: uncharacterized protein LOC105649997 isoform X2 [Jatropha curcas]
12 Hb_007632_080 0.1028214465 - - PREDICTED: intracellular protein transport protein USO1 [Jatropha curcas]
13 Hb_004635_020 0.1032394936 - - PREDICTED: uncharacterized protein At3g28850-like [Jatropha curcas]
14 Hb_002205_180 0.105236554 - - PREDICTED: uncharacterized protein LOC105649178 [Jatropha curcas]
15 Hb_000316_070 0.1054352054 - - PREDICTED: actin-1-like isoform X2 [Cucumis melo]
16 Hb_001761_010 0.1079426973 - - PREDICTED: uncharacterized protein LOC105639282 [Jatropha curcas]
17 Hb_000441_210 0.109241711 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
18 Hb_010705_040 0.11119865 - - PREDICTED: kinesin-4 [Jatropha curcas]
19 Hb_011849_010 0.1171322334 - - PREDICTED: kinesin-like protein KIFC3 isoform X4 [Jatropha curcas]
20 Hb_002686_070 0.1176347432 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000028_530 Hb_000028_530 Hb_000334_120 Hb_000334_120 Hb_000028_530--Hb_000334_120 Hb_000265_100 Hb_000265_100 Hb_000028_530--Hb_000265_100 Hb_002374_090 Hb_002374_090 Hb_000028_530--Hb_002374_090 Hb_000189_350 Hb_000189_350 Hb_000028_530--Hb_000189_350 Hb_033041_010 Hb_033041_010 Hb_000028_530--Hb_033041_010 Hb_004963_020 Hb_004963_020 Hb_000028_530--Hb_004963_020 Hb_000334_120--Hb_033041_010 Hb_001584_360 Hb_001584_360 Hb_000334_120--Hb_001584_360 Hb_000334_120--Hb_000189_350 Hb_000334_120--Hb_000265_100 Hb_005276_090 Hb_005276_090 Hb_000334_120--Hb_005276_090 Hb_010705_040 Hb_010705_040 Hb_000265_100--Hb_010705_040 Hb_000265_100--Hb_002374_090 Hb_000265_100--Hb_004963_020 Hb_002473_030 Hb_002473_030 Hb_000265_100--Hb_002473_030 Hb_011849_010 Hb_011849_010 Hb_002374_090--Hb_011849_010 Hb_000614_200 Hb_000614_200 Hb_002374_090--Hb_000614_200 Hb_119044_040 Hb_119044_040 Hb_002374_090--Hb_119044_040 Hb_003776_050 Hb_003776_050 Hb_002374_090--Hb_003776_050 Hb_000038_070 Hb_000038_070 Hb_002374_090--Hb_000038_070 Hb_000316_070 Hb_000316_070 Hb_002374_090--Hb_000316_070 Hb_033152_060 Hb_033152_060 Hb_000189_350--Hb_033152_060 Hb_002205_180 Hb_002205_180 Hb_000189_350--Hb_002205_180 Hb_000189_350--Hb_000316_070 Hb_027905_040 Hb_027905_040 Hb_000189_350--Hb_027905_040 Hb_000189_350--Hb_011849_010 Hb_007632_080 Hb_007632_080 Hb_033041_010--Hb_007632_080 Hb_005183_150 Hb_005183_150 Hb_033041_010--Hb_005183_150 Hb_101133_050 Hb_101133_050 Hb_033041_010--Hb_101133_050 Hb_033041_010--Hb_005276_090 Hb_004963_020--Hb_002473_030 Hb_004963_020--Hb_000316_070 Hb_001168_030 Hb_001168_030 Hb_004963_020--Hb_001168_030 Hb_001864_040 Hb_001864_040 Hb_004963_020--Hb_001864_040 Hb_002837_030 Hb_002837_030 Hb_004963_020--Hb_002837_030 Hb_005649_050 Hb_005649_050 Hb_004963_020--Hb_005649_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0937333 0.347242 8.88784 2.9459 0.0819822 0.0708033
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0193488 0.0608997 0.115887 0.961907 0.387577

CAGE analysis