Hb_001864_040

Information

Type -
Description -
Location Contig1864: 31556-36933
Sequence    

Annotation

kegg
ID rcu:RCOM_0906510
description kinesin, putative
nr
ID XP_012091426.1
description PREDICTED: kinesin-1 [Jatropha curcas]
swissprot
ID Q07970
description Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=1
trembl
ID A0A067JAN0
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_21293 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin-like protein a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18403: 31530-36871
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001864_040 0.0 - - PREDICTED: kinesin-1 [Jatropha curcas]
2 Hb_004963_020 0.0713941535 - - PREDICTED: patellin-4 [Populus euphratica]
3 Hb_000316_070 0.073478667 - - PREDICTED: actin-1-like isoform X2 [Cucumis melo]
4 Hb_007558_110 0.0821107309 - - PREDICTED: uncharacterized protein LOC105649093 [Jatropha curcas]
5 Hb_002473_030 0.0876521984 - - PREDICTED: osmotic avoidance abnormal protein 3 [Jatropha curcas]
6 Hb_004635_020 0.0879419783 - - PREDICTED: uncharacterized protein At3g28850-like [Jatropha curcas]
7 Hb_033152_060 0.0933407272 - - PREDICTED: phragmoplast orienting kinesin 2 [Jatropha curcas]
8 Hb_004102_090 0.0972010024 transcription factor TF Family: CPP hypothetical protein JCGZ_06186 [Jatropha curcas]
9 Hb_039812_010 0.0972400307 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
10 Hb_001168_030 0.0979626152 - - PREDICTED: G2/mitotic-specific cyclin S13-7 [Jatropha curcas]
11 Hb_000028_530 0.0986888864 - - Protein regulator of cytokinesis, putative [Ricinus communis]
12 Hb_004032_390 0.0990492241 - - CDK, putative [Ricinus communis]
13 Hb_011849_010 0.0993311787 - - PREDICTED: kinesin-like protein KIFC3 isoform X4 [Jatropha curcas]
14 Hb_000189_350 0.1020915289 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 3 [Jatropha curcas]
15 Hb_002374_090 0.1024387438 - - PREDICTED: cyclin-A1-1 [Jatropha curcas]
16 Hb_003776_050 0.1037106197 - - PREDICTED: uncharacterized protein LOC105641219 [Jatropha curcas]
17 Hb_162378_020 0.1053346151 transcription factor TF Family: HMG PREDICTED: high mobility group B protein 13-like [Populus euphratica]
18 Hb_119044_040 0.1055905579 - - cyclin B, putative [Ricinus communis]
19 Hb_001969_120 0.1057282705 - - PREDICTED: plectin [Jatropha curcas]
20 Hb_000614_200 0.1063018427 - - plant mitotic spindle assembly checkpoint protein mad2, putative [Ricinus communis]

Gene co-expression network

sample Hb_001864_040 Hb_001864_040 Hb_004963_020 Hb_004963_020 Hb_001864_040--Hb_004963_020 Hb_000316_070 Hb_000316_070 Hb_001864_040--Hb_000316_070 Hb_007558_110 Hb_007558_110 Hb_001864_040--Hb_007558_110 Hb_002473_030 Hb_002473_030 Hb_001864_040--Hb_002473_030 Hb_004635_020 Hb_004635_020 Hb_001864_040--Hb_004635_020 Hb_033152_060 Hb_033152_060 Hb_001864_040--Hb_033152_060 Hb_004963_020--Hb_002473_030 Hb_004963_020--Hb_000316_070 Hb_001168_030 Hb_001168_030 Hb_004963_020--Hb_001168_030 Hb_002837_030 Hb_002837_030 Hb_004963_020--Hb_002837_030 Hb_005649_050 Hb_005649_050 Hb_004963_020--Hb_005649_050 Hb_011849_010 Hb_011849_010 Hb_000316_070--Hb_011849_010 Hb_000316_070--Hb_004635_020 Hb_000614_200 Hb_000614_200 Hb_000316_070--Hb_000614_200 Hb_004032_390 Hb_004032_390 Hb_000316_070--Hb_004032_390 Hb_007245_030 Hb_007245_030 Hb_000316_070--Hb_007245_030 Hb_000035_190 Hb_000035_190 Hb_007558_110--Hb_000035_190 Hb_001454_180 Hb_001454_180 Hb_007558_110--Hb_001454_180 Hb_162378_020 Hb_162378_020 Hb_007558_110--Hb_162378_020 Hb_007558_110--Hb_004963_020 Hb_011063_030 Hb_011063_030 Hb_007558_110--Hb_011063_030 Hb_002473_030--Hb_005649_050 Hb_002473_030--Hb_004032_390 Hb_001220_020 Hb_001220_020 Hb_002473_030--Hb_001220_020 Hb_002473_030--Hb_002837_030 Hb_003398_050 Hb_003398_050 Hb_002473_030--Hb_003398_050 Hb_000856_390 Hb_000856_390 Hb_004635_020--Hb_000856_390 Hb_000085_360 Hb_000085_360 Hb_004635_020--Hb_000085_360 Hb_080952_060 Hb_080952_060 Hb_004635_020--Hb_080952_060 Hb_119044_040 Hb_119044_040 Hb_004635_020--Hb_119044_040 Hb_004635_020--Hb_007245_030 Hb_000189_350 Hb_000189_350 Hb_033152_060--Hb_000189_350 Hb_033152_060--Hb_000316_070 Hb_002205_180 Hb_002205_180 Hb_033152_060--Hb_002205_180 Hb_027905_040 Hb_027905_040 Hb_033152_060--Hb_027905_040 Hb_033152_060--Hb_004635_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.997927 0.961302 34.0804 10.9884 0.128 0.0815073
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0441644 0.0463386 0.0443107 2.20108 1.45793

CAGE analysis