Hb_003109_010

Information

Type -
Description -
Location Contig3109: 53954-61933
Sequence    

Annotation

kegg
ID rcu:RCOM_1645450
description Carboxy-terminal kinesin, putative
nr
ID XP_012078430.1
description PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
swissprot
ID Q8L7Y8
description Kinesin-like protein KIN12B OS=Arabidopsis thaliana GN=KIN12B PE=1 SV=1
trembl
ID A0A067KJX9
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_13120 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin-like protein kin12b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32932: 53751-55024 , PASA_asmbl_32933: 55110-56492 , PASA_asmbl_32935: 57054-57678 , PASA_asmbl_32936: 59963-61679
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003109_010 0.0 - - PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
2 Hb_033041_010 0.0993120172 - - PREDICTED: phragmoplast orienting kinesin 2-like [Populus euphratica]
3 Hb_007632_080 0.1008449388 - - PREDICTED: intracellular protein transport protein USO1 [Jatropha curcas]
4 Hb_002232_310 0.1046759151 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
5 Hb_001584_360 0.1179576525 - - PREDICTED: serine/threonine-protein kinase haspin homolog hrk1 [Jatropha curcas]
6 Hb_101133_050 0.1191372354 - - PREDICTED: condensin complex subunit 3 [Jatropha curcas]
7 Hb_007943_180 0.1204600642 - - PREDICTED: uncharacterized protein LOC105637734 [Jatropha curcas]
8 Hb_000334_120 0.1224985479 - - PREDICTED: DNA topoisomerase 2 [Jatropha curcas]
9 Hb_000265_100 0.1251132595 - - PREDICTED: uncharacterized protein LOC105643473 [Jatropha curcas]
10 Hb_001501_070 0.1268646808 - - PREDICTED: condensin complex subunit 2 [Jatropha curcas]
11 Hb_004531_080 0.1277304681 - - hypothetical protein RCOM_1491960 [Ricinus communis]
12 Hb_000964_050 0.1293207987 - - PREDICTED: uncharacterized protein LOC105628694 [Jatropha curcas]
13 Hb_000742_180 0.1299528032 - - hypothetical protein POPTR_0011s16640g [Populus trichocarpa]
14 Hb_003935_090 0.130294582 - - PREDICTED: uncharacterized protein At4g38062 [Jatropha curcas]
15 Hb_001755_040 0.1308018214 - - PREDICTED: cyclin-A2-4-like isoform X1 [Jatropha curcas]
16 Hb_010705_040 0.1308760379 - - PREDICTED: kinesin-4 [Jatropha curcas]
17 Hb_000479_020 0.133838113 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005183_150 0.1338832188 - - PREDICTED: protein CYPRO4 [Jatropha curcas]
19 Hb_004129_060 0.1339153696 - - triacylglycerol lipase, putative [Ricinus communis]
20 Hb_000028_530 0.1340132093 - - Protein regulator of cytokinesis, putative [Ricinus communis]

Gene co-expression network

sample Hb_003109_010 Hb_003109_010 Hb_033041_010 Hb_033041_010 Hb_003109_010--Hb_033041_010 Hb_007632_080 Hb_007632_080 Hb_003109_010--Hb_007632_080 Hb_002232_310 Hb_002232_310 Hb_003109_010--Hb_002232_310 Hb_001584_360 Hb_001584_360 Hb_003109_010--Hb_001584_360 Hb_101133_050 Hb_101133_050 Hb_003109_010--Hb_101133_050 Hb_007943_180 Hb_007943_180 Hb_003109_010--Hb_007943_180 Hb_033041_010--Hb_007632_080 Hb_000334_120 Hb_000334_120 Hb_033041_010--Hb_000334_120 Hb_005183_150 Hb_005183_150 Hb_033041_010--Hb_005183_150 Hb_033041_010--Hb_101133_050 Hb_000028_530 Hb_000028_530 Hb_033041_010--Hb_000028_530 Hb_005276_090 Hb_005276_090 Hb_033041_010--Hb_005276_090 Hb_007632_080--Hb_005183_150 Hb_007632_080--Hb_000028_530 Hb_007632_080--Hb_101133_050 Hb_007632_080--Hb_000334_120 Hb_001755_040 Hb_001755_040 Hb_002232_310--Hb_001755_040 Hb_003935_090 Hb_003935_090 Hb_002232_310--Hb_003935_090 Hb_010705_040 Hb_010705_040 Hb_002232_310--Hb_010705_040 Hb_004109_100 Hb_004109_100 Hb_002232_310--Hb_004109_100 Hb_007574_020 Hb_007574_020 Hb_002232_310--Hb_007574_020 Hb_001584_360--Hb_000334_120 Hb_001688_100 Hb_001688_100 Hb_001584_360--Hb_001688_100 Hb_001584_360--Hb_033041_010 Hb_001584_360--Hb_005183_150 Hb_001584_360--Hb_007632_080 Hb_001584_360--Hb_101133_050 Hb_002311_090 Hb_002311_090 Hb_101133_050--Hb_002311_090 Hb_001307_150 Hb_001307_150 Hb_101133_050--Hb_001307_150 Hb_007474_020 Hb_007474_020 Hb_101133_050--Hb_007474_020 Hb_016898_020 Hb_016898_020 Hb_101133_050--Hb_016898_020 Hb_000317_120 Hb_000317_120 Hb_101133_050--Hb_000317_120 Hb_101133_050--Hb_005276_090 Hb_004531_080 Hb_004531_080 Hb_007943_180--Hb_004531_080 Hb_003020_190 Hb_003020_190 Hb_007943_180--Hb_003020_190 Hb_003095_100 Hb_003095_100 Hb_007943_180--Hb_003095_100 Hb_001123_310 Hb_001123_310 Hb_007943_180--Hb_001123_310 Hb_000120_300 Hb_000120_300 Hb_007943_180--Hb_000120_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.292804 0.450493 12.081 5.34388 0.163022 0.212328
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.115895 0.174121 0.254875 1.36272 1.93742

CAGE analysis