Hb_007574_020

Information

Type -
Description -
Location Contig7574: 22236-23165
Sequence    

Annotation

kegg
ID rcu:RCOM_0797410
description hypothetical protein
nr
ID XP_012077284.1
description PREDICTED: uncharacterized protein LOC105638146 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KCZ5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07667 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57075: 22190-23335
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007574_020 0.0 - - PREDICTED: uncharacterized protein LOC105638146 [Jatropha curcas]
2 Hb_003935_090 0.081788438 - - PREDICTED: uncharacterized protein At4g38062 [Jatropha curcas]
3 Hb_004109_100 0.0989425183 - - Interactor of constitutive active rops 1 isoform 1 [Theobroma cacao]
4 Hb_002232_310 0.1080943912 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
5 Hb_005568_140 0.1113557421 - - ATP binding protein, putative [Ricinus communis]
6 Hb_001755_040 0.1146175553 - - PREDICTED: cyclin-A2-4-like isoform X1 [Jatropha curcas]
7 Hb_002243_030 0.1190298383 - - PREDICTED: 65-kDa microtubule-associated protein 3-like isoform X1 [Jatropha curcas]
8 Hb_002918_220 0.1294550903 - - PREDICTED: uncharacterized protein LOC105138896 [Populus euphratica]
9 Hb_002170_060 0.1316788276 - - PREDICTED: mitogen-activated protein kinase-binding protein 1 [Jatropha curcas]
10 Hb_010288_030 0.1328138302 - - PREDICTED: uncharacterized protein LOC105642607 [Jatropha curcas]
11 Hb_012055_080 0.1329431644 - - PREDICTED: lysine-rich arabinogalactan protein 18-like [Jatropha curcas]
12 Hb_003020_190 0.138597796 - - PREDICTED: methylsterol monooxygenase 2-2 [Jatropha curcas]
13 Hb_008643_220 0.1387891079 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Jatropha curcas]
14 Hb_023344_100 0.1396246802 - - PREDICTED: subtilisin-like protease SBT1.2 [Jatropha curcas]
15 Hb_015299_040 0.1402722432 transcription factor TF Family: MYB PREDICTED: myb-related protein 308 [Jatropha curcas]
16 Hb_000349_250 0.1406551368 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Jatropha curcas]
17 Hb_000494_010 0.1439988606 transcription factor TF Family: HB hypothetical protein POPTR_0014s04460g [Populus trichocarpa]
18 Hb_003109_010 0.1447201117 - - PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
19 Hb_071674_010 0.1487439169 transcription factor TF Family: WRKY hypothetical protein POPTR_0006s10950g [Populus trichocarpa]
20 Hb_003777_260 0.1487685873 - - PREDICTED: uncharacterized protein LOC105640927 isoform X4 [Jatropha curcas]

Gene co-expression network

sample Hb_007574_020 Hb_007574_020 Hb_003935_090 Hb_003935_090 Hb_007574_020--Hb_003935_090 Hb_004109_100 Hb_004109_100 Hb_007574_020--Hb_004109_100 Hb_002232_310 Hb_002232_310 Hb_007574_020--Hb_002232_310 Hb_005568_140 Hb_005568_140 Hb_007574_020--Hb_005568_140 Hb_001755_040 Hb_001755_040 Hb_007574_020--Hb_001755_040 Hb_002243_030 Hb_002243_030 Hb_007574_020--Hb_002243_030 Hb_003935_090--Hb_002232_310 Hb_003935_090--Hb_004109_100 Hb_003935_090--Hb_001755_040 Hb_012055_080 Hb_012055_080 Hb_003935_090--Hb_012055_080 Hb_023344_100 Hb_023344_100 Hb_003935_090--Hb_023344_100 Hb_004109_100--Hb_005568_140 Hb_002918_220 Hb_002918_220 Hb_004109_100--Hb_002918_220 Hb_004109_100--Hb_002243_030 Hb_003777_260 Hb_003777_260 Hb_004109_100--Hb_003777_260 Hb_002170_060 Hb_002170_060 Hb_004109_100--Hb_002170_060 Hb_015299_040 Hb_015299_040 Hb_004109_100--Hb_015299_040 Hb_002232_310--Hb_001755_040 Hb_010705_040 Hb_010705_040 Hb_002232_310--Hb_010705_040 Hb_003109_010 Hb_003109_010 Hb_002232_310--Hb_003109_010 Hb_002232_310--Hb_004109_100 Hb_005568_140--Hb_002918_220 Hb_001571_080 Hb_001571_080 Hb_005568_140--Hb_001571_080 Hb_005568_140--Hb_002170_060 Hb_010267_020 Hb_010267_020 Hb_005568_140--Hb_010267_020 Hb_004422_030 Hb_004422_030 Hb_005568_140--Hb_004422_030 Hb_001755_040--Hb_004109_100 Hb_000936_030 Hb_000936_030 Hb_001755_040--Hb_000936_030 Hb_001755_040--Hb_010705_040 Hb_002243_030--Hb_023344_100 Hb_002243_030--Hb_015299_040 Hb_001357_160 Hb_001357_160 Hb_002243_030--Hb_001357_160 Hb_002243_030--Hb_003777_260 Hb_002243_030--Hb_002170_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.25779 11.4246 206.846 64.9672 3.14044 0.442158
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.55445 0.13098 0.319833 9.74511 40.2394

CAGE analysis