Hb_000094_230

Information

Type -
Description -
Location Contig94: 191781-192735
Sequence    

Annotation

kegg
ID tcc:TCM_034021
description Dutp-pyrophosphatase-like 1
nr
ID KDP38491.1
description hypothetical protein JCGZ_04416 [Jatropha curcas]
swissprot
ID Q9STG6
description Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Arabidopsis thaliana GN=DUT PE=1 SV=1
trembl
ID A0A067KQJ5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04416 PE=4 SV=1
Gene Ontology
ID GO:0005829
description deoxyuridine 5 -triphosphate nucleotidohydrolase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000094_230 0.0 - - hypothetical protein JCGZ_04416 [Jatropha curcas]
2 Hb_000979_070 0.0792539908 - - PREDICTED: endoglucanase 8-like [Jatropha curcas]
3 Hb_000535_040 0.08001822 - - PREDICTED: uncharacterized protein LOC105642104 [Jatropha curcas]
4 Hb_020025_030 0.0821583223 transcription factor TF Family: PHD PREDICTED: protein Jade-1 [Populus euphratica]
5 Hb_000140_200 0.0847832692 - - PREDICTED: uncharacterized protein LOC105642928 [Jatropha curcas]
6 Hb_001263_030 0.0967198523 - - PREDICTED: uncharacterized protein At3g28850-like [Jatropha curcas]
7 Hb_004531_060 0.1043250374 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 3 [Jatropha curcas]
8 Hb_020301_020 0.1090780255 - - calmodulin binding protein, putative [Ricinus communis]
9 Hb_003656_080 0.1120312111 - - PREDICTED: corepressor interacting with RBPJ 1-like [Jatropha curcas]
10 Hb_000272_010 0.1180393096 - - PREDICTED: DNA replication licensing factor MCM5 [Jatropha curcas]
11 Hb_006588_100 0.1217136573 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005332_030 0.1241163839 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001782_100 0.1253495052 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
14 Hb_185666_010 0.1270468377 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 3 [Jatropha curcas]
15 Hb_010672_010 0.1301546107 - - hypothetical protein JCGZ_00895 [Jatropha curcas]
16 Hb_001950_090 0.134272025 - - PREDICTED: microtubule-associated protein RP/EB family member 1C [Jatropha curcas]
17 Hb_000030_080 0.1346855207 - - PREDICTED: uncharacterized protein LOC105632640 [Jatropha curcas]
18 Hb_008143_050 0.137733296 - - PREDICTED: cytochrome P450 710A1-like [Jatropha curcas]
19 Hb_000260_670 0.1416777632 - - PREDICTED: serine/threonine-protein kinase TIO isoform X1 [Jatropha curcas]
20 Hb_000152_590 0.1435747581 - - PREDICTED: 21 kDa protein [Jatropha curcas]

Gene co-expression network

sample Hb_000094_230 Hb_000094_230 Hb_000979_070 Hb_000979_070 Hb_000094_230--Hb_000979_070 Hb_000535_040 Hb_000535_040 Hb_000094_230--Hb_000535_040 Hb_020025_030 Hb_020025_030 Hb_000094_230--Hb_020025_030 Hb_000140_200 Hb_000140_200 Hb_000094_230--Hb_000140_200 Hb_001263_030 Hb_001263_030 Hb_000094_230--Hb_001263_030 Hb_004531_060 Hb_004531_060 Hb_000094_230--Hb_004531_060 Hb_185666_010 Hb_185666_010 Hb_000979_070--Hb_185666_010 Hb_000979_070--Hb_000535_040 Hb_001862_160 Hb_001862_160 Hb_000979_070--Hb_001862_160 Hb_000979_070--Hb_020025_030 Hb_000979_070--Hb_000140_200 Hb_000272_010 Hb_000272_010 Hb_000535_040--Hb_000272_010 Hb_008143_050 Hb_008143_050 Hb_000535_040--Hb_008143_050 Hb_001782_100 Hb_001782_100 Hb_000535_040--Hb_001782_100 Hb_000535_040--Hb_001263_030 Hb_020025_030--Hb_000140_200 Hb_020025_030--Hb_001263_030 Hb_020025_030--Hb_004531_060 Hb_003656_080 Hb_003656_080 Hb_020025_030--Hb_003656_080 Hb_000977_190 Hb_000977_190 Hb_020025_030--Hb_000977_190 Hb_006588_100 Hb_006588_100 Hb_000140_200--Hb_006588_100 Hb_000140_200--Hb_001263_030 Hb_000140_200--Hb_003656_080 Hb_000140_200--Hb_000977_190 Hb_000030_080 Hb_000030_080 Hb_001263_030--Hb_000030_080 Hb_001263_030--Hb_004531_060 Hb_005332_030 Hb_005332_030 Hb_001263_030--Hb_005332_030 Hb_001454_270 Hb_001454_270 Hb_001263_030--Hb_001454_270 Hb_004531_060--Hb_003656_080 Hb_004531_060--Hb_000140_200 Hb_004531_060--Hb_006588_100 Hb_001950_090 Hb_001950_090 Hb_004531_060--Hb_001950_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0937943 0.784076 20.0634 17.7608 0.0879958 0.0665488
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0720259 0 0 7.46263 0.791733

CAGE analysis