Hb_000149_020

Information

Type -
Description -
Location Contig149: 29464-30405
Sequence    

Annotation

kegg
ID -
description -
nr
ID KHN10232.1
description Proline-rich receptor-like protein kinase PERK14 [Glycine soja]
swissprot
ID -
description -
trembl
ID A0A0B2PRN8
description Proline-rich receptor-like protein kinase PERK14 OS=Glycine soja GN=glysoja_017836 PE=4 SV=1
Gene Ontology
ID GO:0016772
description serine threonine-protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000149_020 0.0 - - Proline-rich receptor-like protein kinase PERK14 [Glycine soja]
2 Hb_120040_010 0.101685367 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
3 Hb_000740_080 0.1019935483 - - -
4 Hb_006026_020 0.1022933747 - - PREDICTED: BTB/POZ domain-containing protein At5g48800 [Jatropha curcas]
5 Hb_011355_020 0.1029139973 - - extensin, proline-rich protein, putative [Ricinus communis]
6 Hb_000897_010 0.1096153666 - - hypothetical protein JCGZ_13196 [Jatropha curcas]
7 Hb_002897_030 0.1138411579 - - PREDICTED: methylesterase 17 [Jatropha curcas]
8 Hb_000373_260 0.1139340486 - - hypothetical protein POPTR_0002s06820g [Populus trichocarpa]
9 Hb_005214_050 0.1139982214 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
10 Hb_004970_100 0.1241357456 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
11 Hb_000616_100 0.126640403 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
12 Hb_005056_120 0.1275934227 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_000860_030 0.1310060727 - - conserved hypothetical protein [Ricinus communis]
14 Hb_009225_070 0.1316762286 - - tonoplast intrinsic protein, putative [Ricinus communis]
15 Hb_012553_030 0.1339006526 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
16 Hb_004031_050 0.1343066859 - - sinapyl alcohol dehydrogenase-like protein [Populus tremula x Populus tremuloides]
17 Hb_002768_040 0.1373952026 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001255_030 0.1378746375 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840, partial [Sesamum indicum]
19 Hb_002592_070 0.1404360794 - - hypothetical protein VITISV_020993 [Vitis vinifera]
20 Hb_072670_010 0.140598817 - - Calcium-activated outward-rectifying potassium channel, putative [Ricinus communis]

Gene co-expression network

sample Hb_000149_020 Hb_000149_020 Hb_120040_010 Hb_120040_010 Hb_000149_020--Hb_120040_010 Hb_000740_080 Hb_000740_080 Hb_000149_020--Hb_000740_080 Hb_006026_020 Hb_006026_020 Hb_000149_020--Hb_006026_020 Hb_011355_020 Hb_011355_020 Hb_000149_020--Hb_011355_020 Hb_000897_010 Hb_000897_010 Hb_000149_020--Hb_000897_010 Hb_002897_030 Hb_002897_030 Hb_000149_020--Hb_002897_030 Hb_001417_090 Hb_001417_090 Hb_120040_010--Hb_001417_090 Hb_008021_050 Hb_008021_050 Hb_120040_010--Hb_008021_050 Hb_001856_130 Hb_001856_130 Hb_120040_010--Hb_001856_130 Hb_009225_070 Hb_009225_070 Hb_120040_010--Hb_009225_070 Hb_002522_040 Hb_002522_040 Hb_120040_010--Hb_002522_040 Hb_019299_020 Hb_019299_020 Hb_000740_080--Hb_019299_020 Hb_000740_080--Hb_000897_010 Hb_002768_040 Hb_002768_040 Hb_000740_080--Hb_002768_040 Hb_004970_100 Hb_004970_100 Hb_000740_080--Hb_004970_100 Hb_000352_360 Hb_000352_360 Hb_000740_080--Hb_000352_360 Hb_006026_020--Hb_011355_020 Hb_006026_020--Hb_004970_100 Hb_004031_050 Hb_004031_050 Hb_006026_020--Hb_004031_050 Hb_000373_260 Hb_000373_260 Hb_006026_020--Hb_000373_260 Hb_006026_020--Hb_002897_030 Hb_011355_020--Hb_002897_030 Hb_011355_020--Hb_004031_050 Hb_001198_180 Hb_001198_180 Hb_011355_020--Hb_001198_180 Hb_005214_050 Hb_005214_050 Hb_011355_020--Hb_005214_050 Hb_011355_020--Hb_000373_260 Hb_007403_100 Hb_007403_100 Hb_000897_010--Hb_007403_100 Hb_000897_010--Hb_002768_040 Hb_000897_010--Hb_000352_360 Hb_002007_330 Hb_002007_330 Hb_000897_010--Hb_002007_330 Hb_002897_030--Hb_001198_180 Hb_002897_030--Hb_004031_050 Hb_004659_100 Hb_004659_100 Hb_002897_030--Hb_004659_100 Hb_002897_030--Hb_005214_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.50102 0.875629 6.01669 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.787149 0.309385

CAGE analysis