Hb_000897_010

Information

Type -
Description -
Location Contig897: 13-545
Sequence    

Annotation

kegg
ID rcu:RCOM_1408060
description hypothetical protein
nr
ID KDP32271.1
description hypothetical protein JCGZ_13196 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K7T0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13196 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000897_010 0.0 - - hypothetical protein JCGZ_13196 [Jatropha curcas]
2 Hb_007403_100 0.0828690629 - - PREDICTED: probable purple acid phosphatase 20 [Jatropha curcas]
3 Hb_000740_080 0.0957290062 - - -
4 Hb_002768_040 0.1095849288 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000149_020 0.1096153666 - - Proline-rich receptor-like protein kinase PERK14 [Glycine soja]
6 Hb_000352_360 0.1128120643 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
7 Hb_002007_330 0.1164990526 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
8 Hb_022597_010 0.1209221069 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 13 [Vitis vinifera]
9 Hb_027405_010 0.1243541357 - - PREDICTED: uncharacterized protein At3g17950-like [Populus euphratica]
10 Hb_066207_020 0.1274777306 - - hypothetical protein JCGZ_22048 [Jatropha curcas]
11 Hb_008731_010 0.1294299153 - - hypothetical protein POPTR_0605s00010g [Populus trichocarpa]
12 Hb_000327_100 0.1304531658 - - hypothetical protein JCGZ_06658 [Jatropha curcas]
13 Hb_001322_010 0.1309290255 - - PREDICTED: uncharacterized protein LOC105632322 [Jatropha curcas]
14 Hb_000453_290 0.1319506055 - - PREDICTED: dr1-associated corepressor-like [Jatropha curcas]
15 Hb_000000_300 0.1319934058 - - PREDICTED: pathogenesis-related protein 5 [Jatropha curcas]
16 Hb_005245_030 0.1360905531 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At3g07570 [Jatropha curcas]
17 Hb_002000_100 0.1365155079 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]
18 Hb_001257_140 0.1370658296 - - Gb:AAF02129.1, putative [Theobroma cacao]
19 Hb_120040_010 0.1378907583 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
20 Hb_005056_120 0.1383145753 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_000897_010 Hb_000897_010 Hb_007403_100 Hb_007403_100 Hb_000897_010--Hb_007403_100 Hb_000740_080 Hb_000740_080 Hb_000897_010--Hb_000740_080 Hb_002768_040 Hb_002768_040 Hb_000897_010--Hb_002768_040 Hb_000149_020 Hb_000149_020 Hb_000897_010--Hb_000149_020 Hb_000352_360 Hb_000352_360 Hb_000897_010--Hb_000352_360 Hb_002007_330 Hb_002007_330 Hb_000897_010--Hb_002007_330 Hb_007403_100--Hb_002007_330 Hb_002000_100 Hb_002000_100 Hb_007403_100--Hb_002000_100 Hb_008731_010 Hb_008731_010 Hb_007403_100--Hb_008731_010 Hb_000477_020 Hb_000477_020 Hb_007403_100--Hb_000477_020 Hb_000344_030 Hb_000344_030 Hb_007403_100--Hb_000344_030 Hb_019299_020 Hb_019299_020 Hb_000740_080--Hb_019299_020 Hb_000740_080--Hb_000149_020 Hb_000740_080--Hb_002768_040 Hb_004970_100 Hb_004970_100 Hb_000740_080--Hb_004970_100 Hb_000740_080--Hb_000352_360 Hb_005056_120 Hb_005056_120 Hb_002768_040--Hb_005056_120 Hb_027405_010 Hb_027405_010 Hb_002768_040--Hb_027405_010 Hb_003607_080 Hb_003607_080 Hb_002768_040--Hb_003607_080 Hb_002768_040--Hb_000352_360 Hb_120040_010 Hb_120040_010 Hb_000149_020--Hb_120040_010 Hb_006026_020 Hb_006026_020 Hb_000149_020--Hb_006026_020 Hb_011355_020 Hb_011355_020 Hb_000149_020--Hb_011355_020 Hb_002897_030 Hb_002897_030 Hb_000149_020--Hb_002897_030 Hb_002616_020 Hb_002616_020 Hb_000352_360--Hb_002616_020 Hb_001257_140 Hb_001257_140 Hb_000352_360--Hb_001257_140 Hb_002869_090 Hb_002869_090 Hb_000352_360--Hb_002869_090 Hb_170077_020 Hb_170077_020 Hb_000352_360--Hb_170077_020 Hb_003849_170 Hb_003849_170 Hb_000352_360--Hb_003849_170 Hb_000327_100 Hb_000327_100 Hb_000352_360--Hb_000327_100 Hb_002007_330--Hb_002000_100 Hb_002007_330--Hb_008731_010 Hb_002007_330--Hb_000344_030 Hb_002007_330--Hb_000477_020 Hb_142056_010 Hb_142056_010 Hb_002007_330--Hb_142056_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.331896 0.174842 2.18326 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.335535 0.190109

CAGE analysis