Hb_000740_080

Information

Type -
Description -
Location Contig740: 65129-69517
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0005576
description hypothetical protein POPTR_0003s20980g

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000740_080 0.0 - - -
2 Hb_019299_020 0.0903006926 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
3 Hb_000897_010 0.0957290062 - - hypothetical protein JCGZ_13196 [Jatropha curcas]
4 Hb_000149_020 0.1019935483 - - Proline-rich receptor-like protein kinase PERK14 [Glycine soja]
5 Hb_002768_040 0.109889563 - - conserved hypothetical protein [Ricinus communis]
6 Hb_004970_100 0.1163169305 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
7 Hb_000352_360 0.1193356019 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
8 Hb_001322_010 0.1246321029 - - PREDICTED: uncharacterized protein LOC105632322 [Jatropha curcas]
9 Hb_000139_460 0.1253230867 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
10 Hb_066207_020 0.1272380714 - - hypothetical protein JCGZ_22048 [Jatropha curcas]
11 Hb_010863_020 0.1293183999 - - PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X1 [Jatropha curcas]
12 Hb_000000_300 0.1314131122 - - PREDICTED: pathogenesis-related protein 5 [Jatropha curcas]
13 Hb_000373_260 0.1315209922 - - hypothetical protein POPTR_0002s06820g [Populus trichocarpa]
14 Hb_002894_070 0.1326987798 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein B [Jatropha curcas]
15 Hb_000813_020 0.1346906168 - - PREDICTED: metacaspase-3-like [Jatropha curcas]
16 Hb_022597_010 0.1353854311 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 13 [Vitis vinifera]
17 Hb_005214_050 0.1368110966 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
18 Hb_120040_010 0.1369330747 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
19 Hb_001257_140 0.1371795218 - - Gb:AAF02129.1, putative [Theobroma cacao]
20 Hb_020831_060 0.1373500466 - - PREDICTED: uncharacterized protein LOC105631088 [Jatropha curcas]

Gene co-expression network

sample Hb_000740_080 Hb_000740_080 Hb_019299_020 Hb_019299_020 Hb_000740_080--Hb_019299_020 Hb_000897_010 Hb_000897_010 Hb_000740_080--Hb_000897_010 Hb_000149_020 Hb_000149_020 Hb_000740_080--Hb_000149_020 Hb_002768_040 Hb_002768_040 Hb_000740_080--Hb_002768_040 Hb_004970_100 Hb_004970_100 Hb_000740_080--Hb_004970_100 Hb_000352_360 Hb_000352_360 Hb_000740_080--Hb_000352_360 Hb_000139_460 Hb_000139_460 Hb_019299_020--Hb_000139_460 Hb_002304_110 Hb_002304_110 Hb_019299_020--Hb_002304_110 Hb_001257_140 Hb_001257_140 Hb_019299_020--Hb_001257_140 Hb_010863_020 Hb_010863_020 Hb_019299_020--Hb_010863_020 Hb_019299_020--Hb_000352_360 Hb_007403_100 Hb_007403_100 Hb_000897_010--Hb_007403_100 Hb_000897_010--Hb_002768_040 Hb_000897_010--Hb_000149_020 Hb_000897_010--Hb_000352_360 Hb_002007_330 Hb_002007_330 Hb_000897_010--Hb_002007_330 Hb_120040_010 Hb_120040_010 Hb_000149_020--Hb_120040_010 Hb_006026_020 Hb_006026_020 Hb_000149_020--Hb_006026_020 Hb_011355_020 Hb_011355_020 Hb_000149_020--Hb_011355_020 Hb_002897_030 Hb_002897_030 Hb_000149_020--Hb_002897_030 Hb_005056_120 Hb_005056_120 Hb_002768_040--Hb_005056_120 Hb_027405_010 Hb_027405_010 Hb_002768_040--Hb_027405_010 Hb_003607_080 Hb_003607_080 Hb_002768_040--Hb_003607_080 Hb_002768_040--Hb_000352_360 Hb_004970_100--Hb_006026_020 Hb_003777_150 Hb_003777_150 Hb_004970_100--Hb_003777_150 Hb_005214_050 Hb_005214_050 Hb_004970_100--Hb_005214_050 Hb_000373_260 Hb_000373_260 Hb_004970_100--Hb_000373_260 Hb_001417_090 Hb_001417_090 Hb_004970_100--Hb_001417_090 Hb_004031_050 Hb_004031_050 Hb_004970_100--Hb_004031_050 Hb_002616_020 Hb_002616_020 Hb_000352_360--Hb_002616_020 Hb_000352_360--Hb_001257_140 Hb_002869_090 Hb_002869_090 Hb_000352_360--Hb_002869_090 Hb_170077_020 Hb_170077_020 Hb_000352_360--Hb_170077_020 Hb_003849_170 Hb_003849_170 Hb_000352_360--Hb_003849_170 Hb_000327_100 Hb_000327_100 Hb_000352_360--Hb_000327_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.19456 222.201 205.704 1747.36 1.34429 3.32713
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.25605 0 0 193.095 76.7894

CAGE analysis