Hb_005214_050

Information

Type -
Description -
Location Contig5214: 40184-43318
Sequence    

Annotation

kegg
ID rcu:RCOM_0817290
description serine/threonine-protein kinase bri1, putative (EC:1.3.1.74)
nr
ID XP_012074609.1
description PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
swissprot
ID Q9FL28
description LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1
trembl
ID A0A067KIJ5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09914 PE=4 SV=1
Gene Ontology
ID GO:0016301
description lrr receptor-like serine threonine-protein kinase fls2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005214_050 0.0 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
2 Hb_004031_050 0.0693802276 - - sinapyl alcohol dehydrogenase-like protein [Populus tremula x Populus tremuloides]
3 Hb_000373_260 0.0906182332 - - hypothetical protein POPTR_0002s06820g [Populus trichocarpa]
4 Hb_011355_020 0.0909450128 - - extensin, proline-rich protein, putative [Ricinus communis]
5 Hb_000568_020 0.0980275508 - - PREDICTED: probable aquaporin PIP2-5 [Jatropha curcas]
6 Hb_004970_100 0.1019947108 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
7 Hb_002897_030 0.1071578136 - - PREDICTED: methylesterase 17 [Jatropha curcas]
8 Hb_000834_130 0.1080734458 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000149_020 0.1139982214 - - Proline-rich receptor-like protein kinase PERK14 [Glycine soja]
10 Hb_006026_020 0.1159554633 - - PREDICTED: BTB/POZ domain-containing protein At5g48800 [Jatropha curcas]
11 Hb_002304_100 0.1197264976 - - hypothetical protein JCGZ_21524 [Jatropha curcas]
12 Hb_001645_030 0.1223576092 - - PREDICTED: probable auxin efflux carrier component 1b [Jatropha curcas]
13 Hb_120040_010 0.1227403791 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
14 Hb_000243_340 0.1233199206 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
15 Hb_002522_040 0.1240871129 - - hypothetical protein JCGZ_04542 [Jatropha curcas]
16 Hb_001247_090 0.1245512773 - - PREDICTED: uncharacterized protein LOC105647395 [Jatropha curcas]
17 Hb_001198_180 0.1317976863 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
18 Hb_001417_090 0.1365135576 - - PREDICTED: uncharacterized protein LOC105650625 [Jatropha curcas]
19 Hb_000813_020 0.1366601405 - - PREDICTED: metacaspase-3-like [Jatropha curcas]
20 Hb_000740_080 0.1368110966 - - -

Gene co-expression network

sample Hb_005214_050 Hb_005214_050 Hb_004031_050 Hb_004031_050 Hb_005214_050--Hb_004031_050 Hb_000373_260 Hb_000373_260 Hb_005214_050--Hb_000373_260 Hb_011355_020 Hb_011355_020 Hb_005214_050--Hb_011355_020 Hb_000568_020 Hb_000568_020 Hb_005214_050--Hb_000568_020 Hb_004970_100 Hb_004970_100 Hb_005214_050--Hb_004970_100 Hb_002897_030 Hb_002897_030 Hb_005214_050--Hb_002897_030 Hb_004031_050--Hb_011355_020 Hb_004031_050--Hb_002897_030 Hb_002522_040 Hb_002522_040 Hb_004031_050--Hb_002522_040 Hb_006026_020 Hb_006026_020 Hb_004031_050--Hb_006026_020 Hb_001198_180 Hb_001198_180 Hb_004031_050--Hb_001198_180 Hb_000373_260--Hb_011355_020 Hb_000373_260--Hb_006026_020 Hb_000373_260--Hb_004970_100 Hb_000373_260--Hb_004031_050 Hb_000149_020 Hb_000149_020 Hb_000373_260--Hb_000149_020 Hb_011355_020--Hb_002897_030 Hb_011355_020--Hb_006026_020 Hb_011355_020--Hb_001198_180 Hb_000834_130 Hb_000834_130 Hb_000568_020--Hb_000834_130 Hb_002304_100 Hb_002304_100 Hb_000568_020--Hb_002304_100 Hb_000243_340 Hb_000243_340 Hb_000568_020--Hb_000243_340 Hb_001247_090 Hb_001247_090 Hb_000568_020--Hb_001247_090 Hb_000568_020--Hb_004031_050 Hb_004970_100--Hb_006026_020 Hb_003777_150 Hb_003777_150 Hb_004970_100--Hb_003777_150 Hb_001417_090 Hb_001417_090 Hb_004970_100--Hb_001417_090 Hb_004970_100--Hb_004031_050 Hb_002897_030--Hb_001198_180 Hb_004659_100 Hb_004659_100 Hb_002897_030--Hb_004659_100 Hb_002897_030--Hb_006026_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0704046 0.11087 0.375576 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0561812 0.0232716

CAGE analysis