Hb_002007_330

Information

Type -
Description -
Location Contig2007: 220552-222794
Sequence    

Annotation

kegg
ID pop:POPTR_0005s03650g
description hypothetical protein
nr
ID XP_012089446.1
description PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
swissprot
ID F4HZC3
description Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 OS=Arabidopsis thaliana GN=GUX5 PE=2 SV=1
trembl
ID U5GDP2
description Hexosyltransferase OS=Populus trichocarpa GN=POPTR_0005s03650g PE=3 SV=1
Gene Ontology
ID GO:0005794
description udp-glucuronate:xylan alpha-glucuronosyltransferase 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002007_330 0.0 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
2 Hb_007403_100 0.0469282002 - - PREDICTED: probable purple acid phosphatase 20 [Jatropha curcas]
3 Hb_002000_100 0.0502655469 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]
4 Hb_008731_010 0.0603124907 - - hypothetical protein POPTR_0605s00010g [Populus trichocarpa]
5 Hb_000344_030 0.0685039274 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
6 Hb_000477_020 0.0849421389 - - hypothetical protein EUGRSUZ_C011052, partial [Eucalyptus grandis]
7 Hb_142056_010 0.0881625377 - - PREDICTED: MATE efflux family protein 1 isoform X2 [Jatropha curcas]
8 Hb_001360_020 0.0927678835 - - PREDICTED: S-adenosylmethionine synthase 1 [Nelumbo nucifera]
9 Hb_001675_020 0.1001862371 - - -
10 Hb_002384_030 0.1011321237 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000659_050 0.1030874961 - - PREDICTED: basic blue protein-like [Jatropha curcas]
12 Hb_002869_090 0.1123423311 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
13 Hb_000453_290 0.1130045603 - - PREDICTED: dr1-associated corepressor-like [Jatropha curcas]
14 Hb_000327_100 0.1148325154 - - hypothetical protein JCGZ_06658 [Jatropha curcas]
15 Hb_000897_010 0.1164990526 - - hypothetical protein JCGZ_13196 [Jatropha curcas]
16 Hb_001257_140 0.1211493348 - - Gb:AAF02129.1, putative [Theobroma cacao]
17 Hb_027405_010 0.1213133057 - - PREDICTED: uncharacterized protein At3g17950-like [Populus euphratica]
18 Hb_000352_360 0.1239244255 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
19 Hb_010863_020 0.1241602693 - - PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X1 [Jatropha curcas]
20 Hb_003126_120 0.1278644848 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Jatropha curcas]

Gene co-expression network

sample Hb_002007_330 Hb_002007_330 Hb_007403_100 Hb_007403_100 Hb_002007_330--Hb_007403_100 Hb_002000_100 Hb_002000_100 Hb_002007_330--Hb_002000_100 Hb_008731_010 Hb_008731_010 Hb_002007_330--Hb_008731_010 Hb_000344_030 Hb_000344_030 Hb_002007_330--Hb_000344_030 Hb_000477_020 Hb_000477_020 Hb_002007_330--Hb_000477_020 Hb_142056_010 Hb_142056_010 Hb_002007_330--Hb_142056_010 Hb_007403_100--Hb_002000_100 Hb_007403_100--Hb_008731_010 Hb_007403_100--Hb_000477_020 Hb_000897_010 Hb_000897_010 Hb_007403_100--Hb_000897_010 Hb_007403_100--Hb_000344_030 Hb_002000_100--Hb_142056_010 Hb_001360_020 Hb_001360_020 Hb_002000_100--Hb_001360_020 Hb_002000_100--Hb_008731_010 Hb_002384_030 Hb_002384_030 Hb_002000_100--Hb_002384_030 Hb_008731_010--Hb_000344_030 Hb_008731_010--Hb_002384_030 Hb_001257_140 Hb_001257_140 Hb_008731_010--Hb_001257_140 Hb_000659_050 Hb_000659_050 Hb_000344_030--Hb_000659_050 Hb_000910_030 Hb_000910_030 Hb_000344_030--Hb_000910_030 Hb_002869_090 Hb_002869_090 Hb_000344_030--Hb_002869_090 Hb_001675_020 Hb_001675_020 Hb_000477_020--Hb_001675_020 Hb_000477_020--Hb_000344_030 Hb_000327_100 Hb_000327_100 Hb_000477_020--Hb_000327_100 Hb_000477_020--Hb_002000_100 Hb_142056_010--Hb_001360_020 Hb_005391_050 Hb_005391_050 Hb_142056_010--Hb_005391_050 Hb_000453_290 Hb_000453_290 Hb_142056_010--Hb_000453_290 Hb_142056_010--Hb_002384_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.409879 0.237532 3.44349 0 0.0119544
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.441839 0.684912

CAGE analysis