Hb_007403_100

Information

Type -
Description -
Location Contig7403: 70776-76868
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa005956mg
description hypothetical protein
nr
ID XP_012066521.1
description PREDICTED: probable purple acid phosphatase 20 [Jatropha curcas]
swissprot
ID Q9LXI7
description Probable purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1
trembl
ID A0A067L2R6
description Purple acid phosphatase OS=Jatropha curcas GN=JCGZ_23671 PE=3 SV=1
Gene Ontology
ID GO:0003993
description probable purple acid phosphatase 20

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007403_100 0.0 - - PREDICTED: probable purple acid phosphatase 20 [Jatropha curcas]
2 Hb_002007_330 0.0469282002 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
3 Hb_002000_100 0.0671847011 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]
4 Hb_008731_010 0.072289679 - - hypothetical protein POPTR_0605s00010g [Populus trichocarpa]
5 Hb_000477_020 0.0818421464 - - hypothetical protein EUGRSUZ_C011052, partial [Eucalyptus grandis]
6 Hb_000897_010 0.0828690629 - - hypothetical protein JCGZ_13196 [Jatropha curcas]
7 Hb_000344_030 0.0867687264 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
8 Hb_001675_020 0.0894055555 - - -
9 Hb_000327_100 0.1023540203 - - hypothetical protein JCGZ_06658 [Jatropha curcas]
10 Hb_142056_010 0.1038383868 - - PREDICTED: MATE efflux family protein 1 isoform X2 [Jatropha curcas]
11 Hb_000453_290 0.108818859 - - PREDICTED: dr1-associated corepressor-like [Jatropha curcas]
12 Hb_000659_050 0.1099536349 - - PREDICTED: basic blue protein-like [Jatropha curcas]
13 Hb_001360_020 0.1107615395 - - PREDICTED: S-adenosylmethionine synthase 1 [Nelumbo nucifera]
14 Hb_002869_090 0.1138484409 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
15 Hb_000352_360 0.1158243625 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
16 Hb_027405_010 0.1160373088 - - PREDICTED: uncharacterized protein At3g17950-like [Populus euphratica]
17 Hb_002384_030 0.1166905387 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001257_140 0.1195871032 - - Gb:AAF02129.1, putative [Theobroma cacao]
19 Hb_003126_120 0.1235274792 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Jatropha curcas]
20 Hb_002768_040 0.123905065 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007403_100 Hb_007403_100 Hb_002007_330 Hb_002007_330 Hb_007403_100--Hb_002007_330 Hb_002000_100 Hb_002000_100 Hb_007403_100--Hb_002000_100 Hb_008731_010 Hb_008731_010 Hb_007403_100--Hb_008731_010 Hb_000477_020 Hb_000477_020 Hb_007403_100--Hb_000477_020 Hb_000897_010 Hb_000897_010 Hb_007403_100--Hb_000897_010 Hb_000344_030 Hb_000344_030 Hb_007403_100--Hb_000344_030 Hb_002007_330--Hb_002000_100 Hb_002007_330--Hb_008731_010 Hb_002007_330--Hb_000344_030 Hb_002007_330--Hb_000477_020 Hb_142056_010 Hb_142056_010 Hb_002007_330--Hb_142056_010 Hb_002000_100--Hb_142056_010 Hb_001360_020 Hb_001360_020 Hb_002000_100--Hb_001360_020 Hb_002000_100--Hb_008731_010 Hb_002384_030 Hb_002384_030 Hb_002000_100--Hb_002384_030 Hb_008731_010--Hb_000344_030 Hb_008731_010--Hb_002384_030 Hb_001257_140 Hb_001257_140 Hb_008731_010--Hb_001257_140 Hb_001675_020 Hb_001675_020 Hb_000477_020--Hb_001675_020 Hb_000477_020--Hb_000344_030 Hb_000327_100 Hb_000327_100 Hb_000477_020--Hb_000327_100 Hb_000477_020--Hb_002000_100 Hb_000740_080 Hb_000740_080 Hb_000897_010--Hb_000740_080 Hb_002768_040 Hb_002768_040 Hb_000897_010--Hb_002768_040 Hb_000149_020 Hb_000149_020 Hb_000897_010--Hb_000149_020 Hb_000352_360 Hb_000352_360 Hb_000897_010--Hb_000352_360 Hb_000897_010--Hb_002007_330 Hb_000659_050 Hb_000659_050 Hb_000344_030--Hb_000659_050 Hb_000910_030 Hb_000910_030 Hb_000344_030--Hb_000910_030 Hb_002869_090 Hb_002869_090 Hb_000344_030--Hb_002869_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.705536 0.353218 5.59532 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.78286 0.91028

CAGE analysis