Hb_000327_100

Information

Type -
Description -
Location Contig327: 108505-108879
Sequence    

Annotation

kegg
ID pop:POPTR_0008s04530g
description POPTRDRAFT_765352; hypothetical protein
nr
ID KDP46147.1
description hypothetical protein JCGZ_06658 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LCL2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06658 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000327_100 0.0 - - hypothetical protein JCGZ_06658 [Jatropha curcas]
2 Hb_001675_020 0.0550596503 - - -
3 Hb_000659_050 0.0736864115 - - PREDICTED: basic blue protein-like [Jatropha curcas]
4 Hb_002869_090 0.0784899898 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
5 Hb_000352_360 0.0876773898 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
6 Hb_001856_260 0.096146754 - - hypothetical protein JCGZ_09061 [Jatropha curcas]
7 Hb_000477_020 0.0970267355 - - hypothetical protein EUGRSUZ_C011052, partial [Eucalyptus grandis]
8 Hb_000086_530 0.0971922912 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000344_030 0.0989341556 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
10 Hb_007237_060 0.1020595426 - - -
11 Hb_007403_100 0.1023540203 - - PREDICTED: probable purple acid phosphatase 20 [Jatropha curcas]
12 Hb_002616_020 0.1046006882 - - PREDICTED: peroxidase 3 [Jatropha curcas]
13 Hb_001257_140 0.1116522512 - - Gb:AAF02129.1, putative [Theobroma cacao]
14 Hb_002007_330 0.1148325154 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
15 Hb_000561_040 0.1149818442 - - PREDICTED: dirigent protein 19-like [Jatropha curcas]
16 Hb_000163_170 0.1256028449 - - -
17 Hb_008731_010 0.1261078882 - - hypothetical protein POPTR_0605s00010g [Populus trichocarpa]
18 Hb_000069_150 0.1272020785 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
19 Hb_000910_030 0.1289797041 - - conserved hypothetical protein [Ricinus communis]
20 Hb_120357_010 0.1294885035 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000327_100 Hb_000327_100 Hb_001675_020 Hb_001675_020 Hb_000327_100--Hb_001675_020 Hb_000659_050 Hb_000659_050 Hb_000327_100--Hb_000659_050 Hb_002869_090 Hb_002869_090 Hb_000327_100--Hb_002869_090 Hb_000352_360 Hb_000352_360 Hb_000327_100--Hb_000352_360 Hb_001856_260 Hb_001856_260 Hb_000327_100--Hb_001856_260 Hb_000477_020 Hb_000477_020 Hb_000327_100--Hb_000477_020 Hb_001675_020--Hb_000659_050 Hb_001675_020--Hb_000477_020 Hb_007403_100 Hb_007403_100 Hb_001675_020--Hb_007403_100 Hb_001675_020--Hb_002869_090 Hb_007237_060 Hb_007237_060 Hb_001675_020--Hb_007237_060 Hb_000659_050--Hb_002869_090 Hb_000910_030 Hb_000910_030 Hb_000659_050--Hb_000910_030 Hb_000344_030 Hb_000344_030 Hb_000659_050--Hb_000344_030 Hb_002616_020 Hb_002616_020 Hb_000659_050--Hb_002616_020 Hb_002869_090--Hb_002616_020 Hb_002869_090--Hb_000352_360 Hb_027400_020 Hb_027400_020 Hb_002869_090--Hb_027400_020 Hb_000561_040 Hb_000561_040 Hb_002869_090--Hb_000561_040 Hb_000352_360--Hb_002616_020 Hb_001257_140 Hb_001257_140 Hb_000352_360--Hb_001257_140 Hb_170077_020 Hb_170077_020 Hb_000352_360--Hb_170077_020 Hb_003849_170 Hb_003849_170 Hb_000352_360--Hb_003849_170 Hb_000237_060 Hb_000237_060 Hb_001856_260--Hb_000237_060 Hb_000086_530 Hb_000086_530 Hb_001856_260--Hb_000086_530 Hb_001856_260--Hb_007237_060 Hb_049438_020 Hb_049438_020 Hb_001856_260--Hb_049438_020 Hb_000163_170 Hb_000163_170 Hb_001856_260--Hb_000163_170 Hb_000477_020--Hb_007403_100 Hb_002007_330 Hb_002007_330 Hb_000477_020--Hb_002007_330 Hb_000477_020--Hb_000344_030 Hb_002000_100 Hb_002000_100 Hb_000477_020--Hb_002000_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.439517 0.640149 9.04909 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.62286 1.22124

CAGE analysis