Hb_002304_110

Information

Type -
Description -
Location Contig2304: 106794-110440
Sequence    

Annotation

kegg
ID cic:CICLE_v10007809mg
description hypothetical protein
nr
ID EYU28050.1
description hypothetical protein MIMGU_mgv1a023246mg [Erythranthe guttata]
swissprot
ID -
description -
trembl
ID A0A022QNL0
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a023246mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24218: 107091-107281 , PASA_asmbl_24219: 107733-108711 , PASA_asmbl_24220: 108844-109497 , PASA_asmbl_24221: 109522-110377
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002304_110 0.0 - - hypothetical protein MIMGU_mgv1a023246mg [Erythranthe guttata]
2 Hb_001898_030 0.0598066038 - - protein kinase-coding resistance protein [Nicotiana repanda]
3 Hb_000813_020 0.0698934279 - - PREDICTED: metacaspase-3-like [Jatropha curcas]
4 Hb_034713_010 0.0836188287 - - PREDICTED: uncharacterized protein LOC105133378 [Populus euphratica]
5 Hb_009367_070 0.0912218207 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
6 Hb_000334_090 0.0965347128 - - hypothetical protein JCGZ_16789 [Jatropha curcas]
7 Hb_017061_010 0.0966858846 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Jatropha curcas]
8 Hb_019299_020 0.0982018647 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
9 Hb_001006_300 0.1003448528 - - lipid binding protein, putative [Ricinus communis]
10 Hb_005144_150 0.1020278433 - - hypothetical protein VITISV_013572 [Vitis vinifera]
11 Hb_000139_460 0.1038971404 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
12 Hb_003858_070 0.1094491326 - - PREDICTED: uncharacterized protein LOC105647879 [Jatropha curcas]
13 Hb_002326_090 0.1104021407 - - amino acid transporter, putative [Ricinus communis]
14 Hb_004112_080 0.1111567137 - - PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Jatropha curcas]
15 Hb_170077_020 0.1123822728 - - PREDICTED: probable serine incorporator [Jatropha curcas]
16 Hb_000086_510 0.1138127593 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
17 Hb_004705_060 0.1152954592 - - PREDICTED: serine carboxypeptidase-like 45 [Jatropha curcas]
18 Hb_001257_140 0.1235712739 - - Gb:AAF02129.1, putative [Theobroma cacao]
19 Hb_085829_010 0.1246291533 - - PREDICTED: homeobox protein 2-like [Jatropha curcas]
20 Hb_030360_010 0.1260246981 - - -

Gene co-expression network

sample Hb_002304_110 Hb_002304_110 Hb_001898_030 Hb_001898_030 Hb_002304_110--Hb_001898_030 Hb_000813_020 Hb_000813_020 Hb_002304_110--Hb_000813_020 Hb_034713_010 Hb_034713_010 Hb_002304_110--Hb_034713_010 Hb_009367_070 Hb_009367_070 Hb_002304_110--Hb_009367_070 Hb_000334_090 Hb_000334_090 Hb_002304_110--Hb_000334_090 Hb_017061_010 Hb_017061_010 Hb_002304_110--Hb_017061_010 Hb_001898_030--Hb_017061_010 Hb_001006_300 Hb_001006_300 Hb_001898_030--Hb_001006_300 Hb_090210_010 Hb_090210_010 Hb_001898_030--Hb_090210_010 Hb_002326_090 Hb_002326_090 Hb_001898_030--Hb_002326_090 Hb_007292_060 Hb_007292_060 Hb_001898_030--Hb_007292_060 Hb_170077_020 Hb_170077_020 Hb_000813_020--Hb_170077_020 Hb_000813_020--Hb_000334_090 Hb_001257_140 Hb_001257_140 Hb_000813_020--Hb_001257_140 Hb_000813_020--Hb_001898_030 Hb_005144_150 Hb_005144_150 Hb_000813_020--Hb_005144_150 Hb_034713_010--Hb_009367_070 Hb_140627_040 Hb_140627_040 Hb_034713_010--Hb_140627_040 Hb_004705_060 Hb_004705_060 Hb_034713_010--Hb_004705_060 Hb_034713_010--Hb_001898_030 Hb_004112_080 Hb_004112_080 Hb_034713_010--Hb_004112_080 Hb_009367_070--Hb_004705_060 Hb_009367_070--Hb_004112_080 Hb_009367_070--Hb_140627_040 Hb_011628_010 Hb_011628_010 Hb_009367_070--Hb_011628_010 Hb_000207_060 Hb_000207_060 Hb_009367_070--Hb_000207_060 Hb_000086_510 Hb_000086_510 Hb_000334_090--Hb_000086_510 Hb_085829_010 Hb_085829_010 Hb_000334_090--Hb_085829_010 Hb_000334_090--Hb_170077_020 Hb_000352_360 Hb_000352_360 Hb_000334_090--Hb_000352_360 Hb_017061_010--Hb_001006_300 Hb_003858_070 Hb_003858_070 Hb_017061_010--Hb_003858_070 Hb_000964_120 Hb_000964_120 Hb_017061_010--Hb_000964_120 Hb_017061_010--Hb_005144_150 Hb_000497_080 Hb_000497_080 Hb_017061_010--Hb_000497_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.202908 0.863559 4.58697 0 0.00814429
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.291145 0.246591

CAGE analysis