Hb_017061_010

Information

Type -
Description -
Location Contig17061: 5630-7385
Sequence    

Annotation

kegg
ID fve:101304032
description adipocyte plasma membrane-associated protein-like
nr
ID XP_012065360.1
description PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Jatropha curcas]
swissprot
ID Q9CAZ7
description Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis thaliana GN=SSL5 PE=2 SV=1
trembl
ID A0A067LGS5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22367 PE=4 SV=1
Gene Ontology
ID GO:0016844
description protein strictosidine synthase-like 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15947: 5821-6050 , PASA_asmbl_15948: 6200-7199
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017061_010 0.0 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Jatropha curcas]
2 Hb_001006_300 0.0471565634 - - lipid binding protein, putative [Ricinus communis]
3 Hb_003858_070 0.0654056537 - - PREDICTED: uncharacterized protein LOC105647879 [Jatropha curcas]
4 Hb_001898_030 0.0679855111 - - protein kinase-coding resistance protein [Nicotiana repanda]
5 Hb_000964_120 0.082780351 - - DNA-damage-inducible protein f, putative [Ricinus communis]
6 Hb_005144_150 0.0829942016 - - hypothetical protein VITISV_013572 [Vitis vinifera]
7 Hb_000497_080 0.0883311254 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003680_240 0.0883546109 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
9 Hb_013399_060 0.0929154054 - - PREDICTED: uncharacterized protein LOC105133408 [Populus euphratica]
10 Hb_003598_050 0.0950147423 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
11 Hb_002304_110 0.0966858846 - - hypothetical protein MIMGU_mgv1a023246mg [Erythranthe guttata]
12 Hb_007292_060 0.097353939 - - PREDICTED: uncharacterized protein LOC105632853 [Jatropha curcas]
13 Hb_090210_010 0.1000967954 - - neutral alpha-glucosidase ab precursor, putative [Ricinus communis]
14 Hb_002326_090 0.1051098889 - - amino acid transporter, putative [Ricinus communis]
15 Hb_136944_010 0.1052928772 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
16 Hb_000175_600 0.1105408419 - - PREDICTED: TATA-binding protein-associated factor 2N isoform X2 [Jatropha curcas]
17 Hb_011218_010 0.1105578358 - - PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9 [Jatropha curcas]
18 Hb_034713_010 0.1146179823 - - PREDICTED: uncharacterized protein LOC105133378 [Populus euphratica]
19 Hb_003197_050 0.1168133527 - - hypothetical protein JCGZ_04279 [Jatropha curcas]
20 Hb_003152_010 0.1180136572 - - -

Gene co-expression network

sample Hb_017061_010 Hb_017061_010 Hb_001006_300 Hb_001006_300 Hb_017061_010--Hb_001006_300 Hb_003858_070 Hb_003858_070 Hb_017061_010--Hb_003858_070 Hb_001898_030 Hb_001898_030 Hb_017061_010--Hb_001898_030 Hb_000964_120 Hb_000964_120 Hb_017061_010--Hb_000964_120 Hb_005144_150 Hb_005144_150 Hb_017061_010--Hb_005144_150 Hb_000497_080 Hb_000497_080 Hb_017061_010--Hb_000497_080 Hb_001006_300--Hb_003858_070 Hb_001006_300--Hb_001898_030 Hb_013399_060 Hb_013399_060 Hb_001006_300--Hb_013399_060 Hb_001006_300--Hb_000964_120 Hb_001006_300--Hb_005144_150 Hb_003858_070--Hb_005144_150 Hb_003858_070--Hb_013399_060 Hb_180088_010 Hb_180088_010 Hb_003858_070--Hb_180088_010 Hb_010863_020 Hb_010863_020 Hb_003858_070--Hb_010863_020 Hb_002304_110 Hb_002304_110 Hb_001898_030--Hb_002304_110 Hb_090210_010 Hb_090210_010 Hb_001898_030--Hb_090210_010 Hb_002326_090 Hb_002326_090 Hb_001898_030--Hb_002326_090 Hb_007292_060 Hb_007292_060 Hb_001898_030--Hb_007292_060 Hb_000964_120--Hb_007292_060 Hb_000964_120--Hb_002326_090 Hb_003197_050 Hb_003197_050 Hb_000964_120--Hb_003197_050 Hb_011218_010 Hb_011218_010 Hb_000964_120--Hb_011218_010 Hb_000964_120--Hb_090210_010 Hb_001257_140 Hb_001257_140 Hb_005144_150--Hb_001257_140 Hb_003849_170 Hb_003849_170 Hb_005144_150--Hb_003849_170 Hb_005144_150--Hb_001898_030 Hb_006351_050 Hb_006351_050 Hb_000497_080--Hb_006351_050 Hb_003598_050 Hb_003598_050 Hb_000497_080--Hb_003598_050 Hb_000497_080--Hb_003197_050 Hb_000497_080--Hb_180088_010 Hb_001500_020 Hb_001500_020 Hb_000497_080--Hb_001500_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.137203 0.552322 4.39433 0 0.0222902
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.133734 0.380052

CAGE analysis