Hb_090210_010

Information

Type -
Description -
Location Contig90210: 427-822
Sequence    

Annotation

kegg
ID rcu:RCOM_0866510
description neutral alpha-glucosidase ab precursor, putative (EC:3.2.1.20)
nr
ID XP_002519886.1
description neutral alpha-glucosidase ab precursor, putative [Ricinus communis]
swissprot
ID Q9F234
description Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens PE=3 SV=1
trembl
ID B9S1M1
description Neutral alpha-glucosidase ab, putative OS=Ricinus communis GN=RCOM_0866510 PE=3 SV=1
Gene Ontology
ID GO:0009507
description neutral alpha-glucosidase c

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_090210_010 0.0 - - neutral alpha-glucosidase ab precursor, putative [Ricinus communis]
2 Hb_153258_030 0.055379854 - - hypothetical protein RCOM_0853150 [Ricinus communis]
3 Hb_000731_180 0.0597488238 - - hypothetical protein POPTR_0004s01820g [Populus trichocarpa]
4 Hb_000796_110 0.0631848618 - - PREDICTED: probable pectinesterase 53 [Populus euphratica]
5 Hb_007292_060 0.0632214464 - - PREDICTED: uncharacterized protein LOC105632853 [Jatropha curcas]
6 Hb_002326_090 0.0717043747 - - amino acid transporter, putative [Ricinus communis]
7 Hb_002999_020 0.079596809 - - PREDICTED: ribonuclease 3-like [Jatropha curcas]
8 Hb_001416_120 0.0799638889 - - caspase, putative [Ricinus communis]
9 Hb_001898_030 0.0802528748 - - protein kinase-coding resistance protein [Nicotiana repanda]
10 Hb_000964_120 0.080378274 - - DNA-damage-inducible protein f, putative [Ricinus communis]
11 Hb_004732_080 0.081678983 - - PREDICTED: germin-like protein subfamily 3 member 2 [Populus euphratica]
12 Hb_003197_050 0.0938696011 - - hypothetical protein JCGZ_04279 [Jatropha curcas]
13 Hb_001496_150 0.0939758337 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Jatropha curcas]
14 Hb_003680_240 0.0965041969 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
15 Hb_000175_600 0.0989745287 - - PREDICTED: TATA-binding protein-associated factor 2N isoform X2 [Jatropha curcas]
16 Hb_136944_010 0.0998497855 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
17 Hb_017061_010 0.1000967954 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Jatropha curcas]
18 Hb_000155_030 0.1006827435 - - PREDICTED: uncharacterized protein LOC105649591 [Jatropha curcas]
19 Hb_010608_040 0.1053763702 - - PREDICTED: aluminum-activated malate transporter 9-like [Jatropha curcas]
20 Hb_010327_040 0.1068545483 - - hypothetical protein POPTR_0004s17300g [Populus trichocarpa]

Gene co-expression network

sample Hb_090210_010 Hb_090210_010 Hb_153258_030 Hb_153258_030 Hb_090210_010--Hb_153258_030 Hb_000731_180 Hb_000731_180 Hb_090210_010--Hb_000731_180 Hb_000796_110 Hb_000796_110 Hb_090210_010--Hb_000796_110 Hb_007292_060 Hb_007292_060 Hb_090210_010--Hb_007292_060 Hb_002326_090 Hb_002326_090 Hb_090210_010--Hb_002326_090 Hb_002999_020 Hb_002999_020 Hb_090210_010--Hb_002999_020 Hb_153258_030--Hb_002999_020 Hb_153258_030--Hb_000796_110 Hb_001496_150 Hb_001496_150 Hb_153258_030--Hb_001496_150 Hb_001416_120 Hb_001416_120 Hb_153258_030--Hb_001416_120 Hb_000742_040 Hb_000742_040 Hb_153258_030--Hb_000742_040 Hb_004732_080 Hb_004732_080 Hb_000731_180--Hb_004732_080 Hb_011224_030 Hb_011224_030 Hb_000731_180--Hb_011224_030 Hb_007007_140 Hb_007007_140 Hb_000731_180--Hb_007007_140 Hb_024066_020 Hb_024066_020 Hb_000731_180--Hb_024066_020 Hb_002308_040 Hb_002308_040 Hb_000731_180--Hb_002308_040 Hb_000796_110--Hb_002999_020 Hb_000796_110--Hb_001416_120 Hb_000796_110--Hb_000742_040 Hb_000934_120 Hb_000934_120 Hb_000796_110--Hb_000934_120 Hb_000964_120 Hb_000964_120 Hb_007292_060--Hb_000964_120 Hb_007292_060--Hb_002326_090 Hb_000175_600 Hb_000175_600 Hb_007292_060--Hb_000175_600 Hb_004102_180 Hb_004102_180 Hb_007292_060--Hb_004102_180 Hb_011218_010 Hb_011218_010 Hb_007292_060--Hb_011218_010 Hb_002326_090--Hb_000175_600 Hb_002326_090--Hb_000964_120 Hb_002326_090--Hb_004102_180 Hb_001898_030 Hb_001898_030 Hb_002326_090--Hb_001898_030 Hb_002999_020--Hb_000742_040 Hb_002999_020--Hb_001416_120 Hb_124677_070 Hb_124677_070 Hb_002999_020--Hb_124677_070 Hb_016734_110 Hb_016734_110 Hb_002999_020--Hb_016734_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.16004 23.2849 126.204 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.22915 8.72685

CAGE analysis