Hb_000334_090

Information

Type -
Description -
Location Contig334: 91619-92443
Sequence    

Annotation

kegg
ID rcu:RCOM_0966490
description hypothetical protein
nr
ID KDP43502.1
description hypothetical protein JCGZ_16789 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L4Z8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16789 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35025: 93425-93647
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000334_090 0.0 - - hypothetical protein JCGZ_16789 [Jatropha curcas]
2 Hb_000813_020 0.0832515086 - - PREDICTED: metacaspase-3-like [Jatropha curcas]
3 Hb_000086_510 0.0845459947 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
4 Hb_085829_010 0.0876880615 - - PREDICTED: homeobox protein 2-like [Jatropha curcas]
5 Hb_170077_020 0.0924806091 - - PREDICTED: probable serine incorporator [Jatropha curcas]
6 Hb_002304_110 0.0965347128 - - hypothetical protein MIMGU_mgv1a023246mg [Erythranthe guttata]
7 Hb_000352_360 0.1002249702 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
8 Hb_004705_060 0.1032650789 - - PREDICTED: serine carboxypeptidase-like 45 [Jatropha curcas]
9 Hb_000834_130 0.1051009018 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003849_170 0.110401207 - - hypothetical protein JCGZ_17850 [Jatropha curcas]
11 Hb_000568_020 0.1128946067 - - PREDICTED: probable aquaporin PIP2-5 [Jatropha curcas]
12 Hb_000243_340 0.1135360615 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
13 Hb_002616_020 0.113844407 - - PREDICTED: peroxidase 3 [Jatropha curcas]
14 Hb_005144_150 0.1149020195 - - hypothetical protein VITISV_013572 [Vitis vinifera]
15 Hb_000207_060 0.11990464 - - PREDICTED: uncharacterized protein LOC105634368 [Jatropha curcas]
16 Hb_000017_250 0.1199079816 - - PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Jatropha curcas]
17 Hb_001257_140 0.1201423676 - - Gb:AAF02129.1, putative [Theobroma cacao]
18 Hb_001213_060 0.1216803694 - - PREDICTED: uncharacterized protein LOC105646662 [Jatropha curcas]
19 Hb_009367_070 0.1235785478 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
20 Hb_034713_010 0.1249623462 - - PREDICTED: uncharacterized protein LOC105133378 [Populus euphratica]

Gene co-expression network

sample Hb_000334_090 Hb_000334_090 Hb_000813_020 Hb_000813_020 Hb_000334_090--Hb_000813_020 Hb_000086_510 Hb_000086_510 Hb_000334_090--Hb_000086_510 Hb_085829_010 Hb_085829_010 Hb_000334_090--Hb_085829_010 Hb_170077_020 Hb_170077_020 Hb_000334_090--Hb_170077_020 Hb_002304_110 Hb_002304_110 Hb_000334_090--Hb_002304_110 Hb_000352_360 Hb_000352_360 Hb_000334_090--Hb_000352_360 Hb_000813_020--Hb_170077_020 Hb_000813_020--Hb_002304_110 Hb_001257_140 Hb_001257_140 Hb_000813_020--Hb_001257_140 Hb_001898_030 Hb_001898_030 Hb_000813_020--Hb_001898_030 Hb_005144_150 Hb_005144_150 Hb_000813_020--Hb_005144_150 Hb_000086_510--Hb_085829_010 Hb_165110_010 Hb_165110_010 Hb_000086_510--Hb_165110_010 Hb_000320_240 Hb_000320_240 Hb_000086_510--Hb_000320_240 Hb_000157_020 Hb_000157_020 Hb_000086_510--Hb_000157_020 Hb_000243_340 Hb_000243_340 Hb_000086_510--Hb_000243_340 Hb_004705_060 Hb_004705_060 Hb_085829_010--Hb_004705_060 Hb_000017_250 Hb_000017_250 Hb_085829_010--Hb_000017_250 Hb_001213_060 Hb_001213_060 Hb_085829_010--Hb_001213_060 Hb_000853_250 Hb_000853_250 Hb_085829_010--Hb_000853_250 Hb_003849_170 Hb_003849_170 Hb_170077_020--Hb_003849_170 Hb_170077_020--Hb_001257_140 Hb_005648_020 Hb_005648_020 Hb_170077_020--Hb_005648_020 Hb_170077_020--Hb_000352_360 Hb_003607_080 Hb_003607_080 Hb_170077_020--Hb_003607_080 Hb_002304_110--Hb_001898_030 Hb_034713_010 Hb_034713_010 Hb_002304_110--Hb_034713_010 Hb_009367_070 Hb_009367_070 Hb_002304_110--Hb_009367_070 Hb_017061_010 Hb_017061_010 Hb_002304_110--Hb_017061_010 Hb_002616_020 Hb_002616_020 Hb_000352_360--Hb_002616_020 Hb_000352_360--Hb_001257_140 Hb_002869_090 Hb_002869_090 Hb_000352_360--Hb_002869_090 Hb_000352_360--Hb_003849_170 Hb_000327_100 Hb_000327_100 Hb_000352_360--Hb_000327_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0472116 0.265754 1.08565 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.144219 0.102591

CAGE analysis