Hb_009736_020

Information

Type -
Description -
Location Contig9736: 24465-27337
Sequence    

Annotation

kegg
ID rcu:RCOM_1430860
description UDP-N-acetylglucosamine transferase subunit alg13, putative
nr
ID XP_012089098.1
description PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Jatropha curcas]
swissprot
ID Q5I0K7
description UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Rattus norvegicus GN=Alg13 PE=1 SV=1
trembl
ID A0A067JHW6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23374 PE=4 SV=1
Gene Ontology
ID GO:0016758
description udp-n-acetylglucosamine transferase subunit alg13 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63981: 24747-27260
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009736_020 0.0 - - PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Jatropha curcas]
2 Hb_005648_020 0.0789504939 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Jatropha curcas]
3 Hb_004558_060 0.0797626688 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
4 Hb_002171_020 0.0936373633 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]
5 Hb_002918_270 0.0969632239 - - PREDICTED: protein E6-like [Populus euphratica]
6 Hb_178049_010 0.1014864487 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
7 Hb_009252_080 0.1096871556 - - Polygalacturonase-1 non-catalytic subunit beta precursor, putative [Ricinus communis]
8 Hb_005215_050 0.1131976201 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Jatropha curcas]
9 Hb_000162_190 0.1133712311 - - PREDICTED: thaumatin-like protein 1b [Jatropha curcas]
10 Hb_001369_190 0.1140471391 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
11 Hb_003466_010 0.1174453209 - - PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Jatropha curcas]
12 Hb_043552_010 0.1181476989 - - PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B isoform X1 [Jatropha curcas]
13 Hb_025787_020 0.11848423 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 1 [Jatropha curcas]
14 Hb_003893_180 0.1194860136 - - PREDICTED: uncharacterized protein LOC105648771 [Jatropha curcas]
15 Hb_002701_030 0.1231357754 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
16 Hb_006586_040 0.1240071849 - - hypothetical protein POPTR_0011s11750g [Populus trichocarpa]
17 Hb_002518_020 0.1242466603 - - PREDICTED: uncharacterized protein LOC105631164 [Jatropha curcas]
18 Hb_170077_020 0.1248821633 - - PREDICTED: probable serine incorporator [Jatropha curcas]
19 Hb_000329_720 0.1266741039 transcription factor TF Family: ERF hypothetical protein POPTR_0014s05500g [Populus trichocarpa]
20 Hb_000568_020 0.1277317557 - - PREDICTED: probable aquaporin PIP2-5 [Jatropha curcas]

Gene co-expression network

sample Hb_009736_020 Hb_009736_020 Hb_005648_020 Hb_005648_020 Hb_009736_020--Hb_005648_020 Hb_004558_060 Hb_004558_060 Hb_009736_020--Hb_004558_060 Hb_002171_020 Hb_002171_020 Hb_009736_020--Hb_002171_020 Hb_002918_270 Hb_002918_270 Hb_009736_020--Hb_002918_270 Hb_178049_010 Hb_178049_010 Hb_009736_020--Hb_178049_010 Hb_009252_080 Hb_009252_080 Hb_009736_020--Hb_009252_080 Hb_003466_010 Hb_003466_010 Hb_005648_020--Hb_003466_010 Hb_003607_080 Hb_003607_080 Hb_005648_020--Hb_003607_080 Hb_003849_170 Hb_003849_170 Hb_005648_020--Hb_003849_170 Hb_000093_010 Hb_000093_010 Hb_005648_020--Hb_000093_010 Hb_170077_020 Hb_170077_020 Hb_005648_020--Hb_170077_020 Hb_001369_190 Hb_001369_190 Hb_004558_060--Hb_001369_190 Hb_004558_060--Hb_002171_020 Hb_004558_060--Hb_005648_020 Hb_002518_020 Hb_002518_020 Hb_004558_060--Hb_002518_020 Hb_004558_060--Hb_002918_270 Hb_009189_100 Hb_009189_100 Hb_002171_020--Hb_009189_100 Hb_000329_720 Hb_000329_720 Hb_002171_020--Hb_000329_720 Hb_002171_020--Hb_178049_010 Hb_000005_360 Hb_000005_360 Hb_002171_020--Hb_000005_360 Hb_015934_080 Hb_015934_080 Hb_002171_020--Hb_015934_080 Hb_050898_030 Hb_050898_030 Hb_002918_270--Hb_050898_030 Hb_001789_230 Hb_001789_230 Hb_002918_270--Hb_001789_230 Hb_002918_270--Hb_005648_020 Hb_015292_020 Hb_015292_020 Hb_002918_270--Hb_015292_020 Hb_002918_270--Hb_003466_010 Hb_012132_050 Hb_012132_050 Hb_002918_270--Hb_012132_050 Hb_178049_010--Hb_005648_020 Hb_178049_010--Hb_003466_010 Hb_122951_010 Hb_122951_010 Hb_178049_010--Hb_122951_010 Hb_178049_010--Hb_004558_060 Hb_043552_010 Hb_043552_010 Hb_009252_080--Hb_043552_010 Hb_001709_090 Hb_001709_090 Hb_009252_080--Hb_001709_090 Hb_025787_020 Hb_025787_020 Hb_009252_080--Hb_025787_020 Hb_001056_040 Hb_001056_040 Hb_009252_080--Hb_001056_040 Hb_000162_190 Hb_000162_190 Hb_009252_080--Hb_000162_190 Hb_000345_230 Hb_000345_230 Hb_009252_080--Hb_000345_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.119908 0.605758 1.87391 5.42672 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.557461 1.0565

CAGE analysis