Hb_000946_050

Information

Type -
Description -
Location Contig946: 36204-42813
Sequence    

Annotation

kegg
ID cam:101505071
description uncharacterized LOC101505071
nr
ID XP_002531093.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9LSF8
description Cytochrome P450 82G1 OS=Arabidopsis thaliana GN=CYP82G1 PE=1 SV=1
trembl
ID B9SYM4
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1417690 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 82g1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63257: 36207-39437 , PASA_asmbl_63258: 40438-42876
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000946_050 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_000092_030 0.0451981033 - - PREDICTED: uncharacterized protein LOC105111213 [Populus euphratica]
3 Hb_000096_210 0.0756671262 - - PREDICTED: probable carboxylesterase 7 [Jatropha curcas]
4 Hb_004122_060 0.0893812162 - - PREDICTED: uncharacterized acetyltransferase At3g50280-like [Jatropha curcas]
5 Hb_059000_010 0.0894206353 - - hypothetical protein JCGZ_17736 [Jatropha curcas]
6 Hb_002450_180 0.0915361262 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001141_160 0.0942321944 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
8 Hb_001544_070 0.1030482072 - - PREDICTED: multicopper oxidase LPR1 [Jatropha curcas]
9 Hb_014250_010 0.1036359236 - - PREDICTED: alpha-mannosidase-like isoform X2 [Populus euphratica]
10 Hb_009554_030 0.1064924288 - - PREDICTED: chlorophyll synthase, chloroplastic [Prunus mume]
11 Hb_030982_050 0.1068809347 - - PREDICTED: gamma-glutamyl hydrolase 2-like [Jatropha curcas]
12 Hb_000085_220 0.1070776912 - - conserved hypothetical protein [Ricinus communis]
13 Hb_006634_090 0.1133266377 - - PREDICTED: uncharacterized protein LOC105646581 [Jatropha curcas]
14 Hb_004166_020 0.114563786 - - -
15 Hb_012787_060 0.1183189973 - - PREDICTED: glutathione S-transferase U17-like [Prunus mume]
16 Hb_000163_180 0.1191523482 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]
17 Hb_000398_140 0.1204191709 - - PREDICTED: methionine S-methyltransferase [Jatropha curcas]
18 Hb_000411_050 0.1211164966 - - hypothetical protein AMTR_s00066p00166230 [Amborella trichopoda]
19 Hb_000477_110 0.1260110014 transcription factor TF Family: GRAS PREDICTED: DELLA protein SLR1-like [Jatropha curcas]
20 Hb_002301_370 0.1274930969 - - hypothetical protein JCGZ_21454 [Jatropha curcas]

Gene co-expression network

sample Hb_000946_050 Hb_000946_050 Hb_000092_030 Hb_000092_030 Hb_000946_050--Hb_000092_030 Hb_000096_210 Hb_000096_210 Hb_000946_050--Hb_000096_210 Hb_004122_060 Hb_004122_060 Hb_000946_050--Hb_004122_060 Hb_059000_010 Hb_059000_010 Hb_000946_050--Hb_059000_010 Hb_002450_180 Hb_002450_180 Hb_000946_050--Hb_002450_180 Hb_001141_160 Hb_001141_160 Hb_000946_050--Hb_001141_160 Hb_000085_220 Hb_000085_220 Hb_000092_030--Hb_000085_220 Hb_004166_020 Hb_004166_020 Hb_000092_030--Hb_004166_020 Hb_001544_070 Hb_001544_070 Hb_000092_030--Hb_001544_070 Hb_000092_030--Hb_004122_060 Hb_006269_010 Hb_006269_010 Hb_000092_030--Hb_006269_010 Hb_009554_030 Hb_009554_030 Hb_000096_210--Hb_009554_030 Hb_014250_010 Hb_014250_010 Hb_000096_210--Hb_014250_010 Hb_039022_020 Hb_039022_020 Hb_000096_210--Hb_039022_020 Hb_000096_210--Hb_004122_060 Hb_005766_010 Hb_005766_010 Hb_000096_210--Hb_005766_010 Hb_004122_060--Hb_059000_010 Hb_004122_060--Hb_009554_030 Hb_004122_060--Hb_001544_070 Hb_004122_060--Hb_001141_160 Hb_059000_010--Hb_001141_160 Hb_059000_010--Hb_009554_030 Hb_059000_010--Hb_001544_070 Hb_059000_010--Hb_014250_010 Hb_000411_050 Hb_000411_050 Hb_002450_180--Hb_000411_050 Hb_000454_200 Hb_000454_200 Hb_002450_180--Hb_000454_200 Hb_000847_050 Hb_000847_050 Hb_002450_180--Hb_000847_050 Hb_006634_090 Hb_006634_090 Hb_002450_180--Hb_006634_090 Hb_003376_300 Hb_003376_300 Hb_002450_180--Hb_003376_300 Hb_000398_140 Hb_000398_140 Hb_001141_160--Hb_000398_140 Hb_030982_050 Hb_030982_050 Hb_001141_160--Hb_030982_050 Hb_001141_160--Hb_001544_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00787783 22.4821 25.4383 25.847 0 0.00590118
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0866361 0.0113627 0 23.2272 13.9896

CAGE analysis