Hb_000096_210

Information

Type -
Description -
Location Contig96: 219394-220350
Sequence    

Annotation

kegg
ID tcc:TCM_007028
description Alpha/beta-Hydrolases superfamily protein, putative
nr
ID XP_012086301.1
description PREDICTED: probable carboxylesterase 7 [Jatropha curcas]
swissprot
ID Q9SMN0
description Probable carboxylesterase 12 OS=Arabidopsis thaliana GN=CXE12 PE=1 SV=1
trembl
ID A0A067K102
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22845 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable carboxylesterase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 002_A06.ab1: 219562-220359 , 026_C12.ab1: 219723-220359 , 042_N17.ab1: 219618-220359 , 044_M10.ab1: 219622-220359

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000096_210 0.0 - - PREDICTED: probable carboxylesterase 7 [Jatropha curcas]
2 Hb_000946_050 0.0756671262 - - cytochrome P450, putative [Ricinus communis]
3 Hb_009554_030 0.0793740854 - - PREDICTED: chlorophyll synthase, chloroplastic [Prunus mume]
4 Hb_014250_010 0.0811025639 - - PREDICTED: alpha-mannosidase-like isoform X2 [Populus euphratica]
5 Hb_039022_020 0.0850093282 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
6 Hb_004122_060 0.0928402587 - - PREDICTED: uncharacterized acetyltransferase At3g50280-like [Jatropha curcas]
7 Hb_005766_010 0.0973967963 - - serine carboxypeptidase, putative [Ricinus communis]
8 Hb_059000_010 0.0976151745 - - hypothetical protein JCGZ_17736 [Jatropha curcas]
9 Hb_000739_160 0.0996067216 - - DNA binding protein, putative [Ricinus communis]
10 Hb_000092_030 0.1057289745 - - PREDICTED: uncharacterized protein LOC105111213 [Populus euphratica]
11 Hb_006634_090 0.1065504274 - - PREDICTED: uncharacterized protein LOC105646581 [Jatropha curcas]
12 Hb_000203_080 0.1086139427 - - Xylem bark cysteine peptidase 3 isoform 1 [Theobroma cacao]
13 Hb_001141_160 0.1112000674 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
14 Hb_000840_050 0.1119745147 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Vitis vinifera]
15 Hb_000594_160 0.1126880207 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 8 [Jatropha curcas]
16 Hb_083412_010 0.1133439145 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
17 Hb_001349_020 0.1171091942 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
18 Hb_002450_180 0.1174062436 - - conserved hypothetical protein [Ricinus communis]
19 Hb_005679_110 0.1195749007 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
20 Hb_000398_140 0.1197504253 - - PREDICTED: methionine S-methyltransferase [Jatropha curcas]

Gene co-expression network

sample Hb_000096_210 Hb_000096_210 Hb_000946_050 Hb_000946_050 Hb_000096_210--Hb_000946_050 Hb_009554_030 Hb_009554_030 Hb_000096_210--Hb_009554_030 Hb_014250_010 Hb_014250_010 Hb_000096_210--Hb_014250_010 Hb_039022_020 Hb_039022_020 Hb_000096_210--Hb_039022_020 Hb_004122_060 Hb_004122_060 Hb_000096_210--Hb_004122_060 Hb_005766_010 Hb_005766_010 Hb_000096_210--Hb_005766_010 Hb_000092_030 Hb_000092_030 Hb_000946_050--Hb_000092_030 Hb_000946_050--Hb_004122_060 Hb_059000_010 Hb_059000_010 Hb_000946_050--Hb_059000_010 Hb_002450_180 Hb_002450_180 Hb_000946_050--Hb_002450_180 Hb_001141_160 Hb_001141_160 Hb_000946_050--Hb_001141_160 Hb_009554_030--Hb_004122_060 Hb_009554_030--Hb_059000_010 Hb_000866_190 Hb_000866_190 Hb_009554_030--Hb_000866_190 Hb_009554_030--Hb_014250_010 Hb_015306_010 Hb_015306_010 Hb_009554_030--Hb_015306_010 Hb_015001_030 Hb_015001_030 Hb_014250_010--Hb_015001_030 Hb_014250_010--Hb_005766_010 Hb_014250_010--Hb_000866_190 Hb_001638_150 Hb_001638_150 Hb_014250_010--Hb_001638_150 Hb_011472_020 Hb_011472_020 Hb_039022_020--Hb_011472_020 Hb_005542_040 Hb_005542_040 Hb_039022_020--Hb_005542_040 Hb_001318_120 Hb_001318_120 Hb_039022_020--Hb_001318_120 Hb_166009_010 Hb_166009_010 Hb_039022_020--Hb_166009_010 Hb_000840_050 Hb_000840_050 Hb_039022_020--Hb_000840_050 Hb_004122_060--Hb_059000_010 Hb_001544_070 Hb_001544_070 Hb_004122_060--Hb_001544_070 Hb_004122_060--Hb_001141_160 Hb_004122_060--Hb_000092_030 Hb_000594_160 Hb_000594_160 Hb_005766_010--Hb_000594_160 Hb_005766_010--Hb_000866_190 Hb_000017_320 Hb_000017_320 Hb_005766_010--Hb_000017_320 Hb_005731_070 Hb_005731_070 Hb_005766_010--Hb_005731_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.584396 65.0732 87.9797 79.9031 0.114113 0.245189
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.321262 0.16844 0 105.397 50.4038

CAGE analysis