Hb_015306_010

Information

Type -
Description -
Location Contig15306: 18796-21063
Sequence    

Annotation

kegg
ID rcu:RCOM_0519540
description hypothetical protein
nr
ID XP_012075008.1
description PREDICTED: uncharacterized protein LOC105636357 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LMB2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11843 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13157: 18790-19027
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015306_010 0.0 - - PREDICTED: uncharacterized protein LOC105636357 [Jatropha curcas]
2 Hb_000866_190 0.091094666 - - transcription factor, putative [Ricinus communis]
3 Hb_003106_110 0.0928667716 - - betaine aldehyde dehydrogenase 1, chloroplastic [Jatropha curcas]
4 Hb_009554_030 0.0978251023 - - PREDICTED: chlorophyll synthase, chloroplastic [Prunus mume]
5 Hb_000398_140 0.1064306791 - - PREDICTED: methionine S-methyltransferase [Jatropha curcas]
6 Hb_004122_060 0.1080307254 - - PREDICTED: uncharacterized acetyltransferase At3g50280-like [Jatropha curcas]
7 Hb_000258_210 0.1156066045 - - prenyl-dependent CAAX protease, putative [Ricinus communis]
8 Hb_059000_010 0.1156645295 - - hypothetical protein JCGZ_17736 [Jatropha curcas]
9 Hb_000739_160 0.116096295 - - DNA binding protein, putative [Ricinus communis]
10 Hb_011537_020 0.1170074876 - - PREDICTED: uncharacterized serine-rich protein C215.13-like [Jatropha curcas]
11 Hb_000203_080 0.1192804273 - - Xylem bark cysteine peptidase 3 isoform 1 [Theobroma cacao]
12 Hb_000594_160 0.1222042135 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 8 [Jatropha curcas]
13 Hb_000096_210 0.1238143182 - - PREDICTED: probable carboxylesterase 7 [Jatropha curcas]
14 Hb_001109_130 0.1241976464 - - PREDICTED: coiled-coil domain-containing protein 136 isoform X1 [Jatropha curcas]
15 Hb_007386_030 0.1256881945 - - PREDICTED: formin-like protein 2 [Jatropha curcas]
16 Hb_014967_020 0.1266271897 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
17 Hb_005766_010 0.126789746 - - serine carboxypeptidase, putative [Ricinus communis]
18 Hb_006469_090 0.130614876 - - PREDICTED: LOW QUALITY PROTEIN: myosin-11 [Jatropha curcas]
19 Hb_010880_010 0.1313337087 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
20 Hb_001141_160 0.1316816163 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]

Gene co-expression network

sample Hb_015306_010 Hb_015306_010 Hb_000866_190 Hb_000866_190 Hb_015306_010--Hb_000866_190 Hb_003106_110 Hb_003106_110 Hb_015306_010--Hb_003106_110 Hb_009554_030 Hb_009554_030 Hb_015306_010--Hb_009554_030 Hb_000398_140 Hb_000398_140 Hb_015306_010--Hb_000398_140 Hb_004122_060 Hb_004122_060 Hb_015306_010--Hb_004122_060 Hb_000258_210 Hb_000258_210 Hb_015306_010--Hb_000258_210 Hb_000866_190--Hb_009554_030 Hb_006469_090 Hb_006469_090 Hb_000866_190--Hb_006469_090 Hb_014250_010 Hb_014250_010 Hb_000866_190--Hb_014250_010 Hb_005766_010 Hb_005766_010 Hb_000866_190--Hb_005766_010 Hb_001135_010 Hb_001135_010 Hb_000866_190--Hb_001135_010 Hb_000739_160 Hb_000739_160 Hb_003106_110--Hb_000739_160 Hb_002301_370 Hb_002301_370 Hb_003106_110--Hb_002301_370 Hb_005485_070 Hb_005485_070 Hb_003106_110--Hb_005485_070 Hb_000085_380 Hb_000085_380 Hb_003106_110--Hb_000085_380 Hb_000760_080 Hb_000760_080 Hb_003106_110--Hb_000760_080 Hb_009554_030--Hb_004122_060 Hb_059000_010 Hb_059000_010 Hb_009554_030--Hb_059000_010 Hb_000096_210 Hb_000096_210 Hb_009554_030--Hb_000096_210 Hb_009554_030--Hb_014250_010 Hb_004421_010 Hb_004421_010 Hb_000398_140--Hb_004421_010 Hb_000398_140--Hb_059000_010 Hb_001141_160 Hb_001141_160 Hb_000398_140--Hb_001141_160 Hb_001189_100 Hb_001189_100 Hb_000398_140--Hb_001189_100 Hb_000398_140--Hb_004122_060 Hb_012743_020 Hb_012743_020 Hb_000398_140--Hb_012743_020 Hb_004122_060--Hb_059000_010 Hb_001544_070 Hb_001544_070 Hb_004122_060--Hb_001544_070 Hb_000946_050 Hb_000946_050 Hb_004122_060--Hb_000946_050 Hb_004122_060--Hb_001141_160 Hb_000092_030 Hb_000092_030 Hb_004122_060--Hb_000092_030 Hb_014967_020 Hb_014967_020 Hb_000258_210--Hb_014967_020 Hb_001109_130 Hb_001109_130 Hb_000258_210--Hb_001109_130 Hb_065521_010 Hb_065521_010 Hb_000258_210--Hb_065521_010 Hb_004943_010 Hb_004943_010 Hb_000258_210--Hb_004943_010 Hb_009641_040 Hb_009641_040 Hb_000258_210--Hb_009641_040 Hb_007875_020 Hb_007875_020 Hb_000258_210--Hb_007875_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0709066 1.33067 1.56818 1.96523 0.0410578 0.0309101
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0154601 0 2.48213 1.96713

CAGE analysis