Hb_014250_010

Information

Type -
Description -
Location Contig14250: 2297-6947
Sequence    

Annotation

kegg
ID pop:POPTR_0014s14050g
description POPTRDRAFT_572859; glycosyl hydrolase family 38 family protein
nr
ID XP_011033761.1
description PREDICTED: alpha-mannosidase-like isoform X2 [Populus euphratica]
swissprot
ID C0HJB3
description Alpha-mannosidase OS=Canavalia ensiformis PE=1 SV=1
trembl
ID A0A067LBI4
description Alpha-mannosidase OS=Jatropha curcas GN=JCGZ_26873 PE=3 SV=1
Gene Ontology
ID GO:0015923
description lysosomal alpha-mannosidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014250_010 0.0 - - PREDICTED: alpha-mannosidase-like isoform X2 [Populus euphratica]
2 Hb_000096_210 0.0811025639 - - PREDICTED: probable carboxylesterase 7 [Jatropha curcas]
3 Hb_009554_030 0.0813550906 - - PREDICTED: chlorophyll synthase, chloroplastic [Prunus mume]
4 Hb_015001_030 0.0848369515 - - inosine-uridine preferring nucleoside hydrolase family protein [Populus trichocarpa]
5 Hb_005766_010 0.0859476792 - - serine carboxypeptidase, putative [Ricinus communis]
6 Hb_000866_190 0.0890726978 - - transcription factor, putative [Ricinus communis]
7 Hb_001638_150 0.0911386787 - - acyltransferase, putative [Ricinus communis]
8 Hb_059000_010 0.0944037321 - - hypothetical protein JCGZ_17736 [Jatropha curcas]
9 Hb_002503_050 0.0945825722 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
10 Hb_001135_010 0.0997224477 - - hypothetical protein CICLE_v10024612mg [Citrus clementina]
11 Hb_001141_160 0.1018049667 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
12 Hb_021346_020 0.102106764 - - hypothetical protein JCGZ_26746 [Jatropha curcas]
13 Hb_001345_020 0.1032850208 - - hypothetical protein POPTR_0007s10400g [Populus trichocarpa]
14 Hb_000946_050 0.1036359236 - - cytochrome P450, putative [Ricinus communis]
15 Hb_000189_160 0.1057949435 - - PREDICTED: GDP-mannose 3,5-epimerase 2 [Eucalyptus grandis]
16 Hb_030982_050 0.1133661513 - - PREDICTED: gamma-glutamyl hydrolase 2-like [Jatropha curcas]
17 Hb_000594_160 0.1167540387 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 8 [Jatropha curcas]
18 Hb_001349_020 0.1174583402 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
19 Hb_083412_010 0.1183243175 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
20 Hb_000046_430 0.1193904551 - - hypothetical protein JCGZ_02013 [Jatropha curcas]

Gene co-expression network

sample Hb_014250_010 Hb_014250_010 Hb_000096_210 Hb_000096_210 Hb_014250_010--Hb_000096_210 Hb_009554_030 Hb_009554_030 Hb_014250_010--Hb_009554_030 Hb_015001_030 Hb_015001_030 Hb_014250_010--Hb_015001_030 Hb_005766_010 Hb_005766_010 Hb_014250_010--Hb_005766_010 Hb_000866_190 Hb_000866_190 Hb_014250_010--Hb_000866_190 Hb_001638_150 Hb_001638_150 Hb_014250_010--Hb_001638_150 Hb_000946_050 Hb_000946_050 Hb_000096_210--Hb_000946_050 Hb_000096_210--Hb_009554_030 Hb_039022_020 Hb_039022_020 Hb_000096_210--Hb_039022_020 Hb_004122_060 Hb_004122_060 Hb_000096_210--Hb_004122_060 Hb_000096_210--Hb_005766_010 Hb_009554_030--Hb_004122_060 Hb_059000_010 Hb_059000_010 Hb_009554_030--Hb_059000_010 Hb_009554_030--Hb_000866_190 Hb_015306_010 Hb_015306_010 Hb_009554_030--Hb_015306_010 Hb_015001_030--Hb_001638_150 Hb_021346_020 Hb_021346_020 Hb_015001_030--Hb_021346_020 Hb_001135_010 Hb_001135_010 Hb_015001_030--Hb_001135_010 Hb_093218_010 Hb_093218_010 Hb_015001_030--Hb_093218_010 Hb_003656_090 Hb_003656_090 Hb_015001_030--Hb_003656_090 Hb_000594_160 Hb_000594_160 Hb_005766_010--Hb_000594_160 Hb_005766_010--Hb_000866_190 Hb_000017_320 Hb_000017_320 Hb_005766_010--Hb_000017_320 Hb_005731_070 Hb_005731_070 Hb_005766_010--Hb_005731_070 Hb_006469_090 Hb_006469_090 Hb_000866_190--Hb_006469_090 Hb_000866_190--Hb_015306_010 Hb_000866_190--Hb_001135_010 Hb_001440_010 Hb_001440_010 Hb_001638_150--Hb_001440_010 Hb_000010_440 Hb_000010_440 Hb_001638_150--Hb_000010_440 Hb_003092_020 Hb_003092_020 Hb_001638_150--Hb_003092_020 Hb_001638_150--Hb_003656_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0351105 7.7611 17.4844 13.584 0.0164472 0.015426
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0400907 0 0 14.6896 9.6647

CAGE analysis